Chlorine in PDB 7y8i: Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7

Protein crystallography data

The structure of Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7, PDB code: 7y8i was solved by Q.Chen, Y.Yu, J.Cheng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.77 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 69.113, 85.776, 106.238, 90, 90, 90
R / Rfree (%) 19.8 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7 (pdb code 7y8i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7, PDB code: 7y8i:

Chlorine binding site 1 out of 1 in 7y8i

Go back to Chlorine Binding Sites List in 7y8i
Chlorine binding site 1 out of 1 in the Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sdscam FNIII3 Domain, Isoform ALPHA7 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl603

b:48.6
occ:1.00
HE3 E:LYS537 2.8 36.7 1.0
HE2 E:LYS537 3.0 36.7 1.0
CE E:LYS537 3.3 30.5 1.0
HZ1 E:LYS537 3.5 35.9 1.0
NZ E:LYS537 4.0 29.9 1.0
HH22 E:ARG560 4.2 13.9 1.0
HZ2 E:LYS537 4.5 35.9 1.0
HZ3 E:LYS537 4.6 35.9 1.0
CD E:LYS537 4.7 25.5 1.0
HD2 E:LYS537 4.7 30.7 1.0
O E:HOH726 4.8 23.4 1.0
NH2 E:ARG560 4.8 11.6 1.0
HH21 E:ARG560 4.9 13.9 1.0

Reference:

J.Cheng, Y.Yu, X.Wang, X.Zheng, T.Liu, D.Hu, Y.Jin, Y.Lai, T.M.Fu, Q.Chen. Structural Basis For the Self-Recognition of Sdscam in Chelicerata. Nat Commun V. 14 2522 2023.
ISSN: ESSN 2041-1723
PubMed: 37130844
DOI: 10.1038/S41467-023-38205-1
Page generated: Tue Jul 30 05:55:58 2024

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