Chlorine in PDB 7yr2: Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1)

Enzymatic activity of Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1)

All present enzymatic activity of Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1):
3.4.17.23;

Other elements in 7yr2:

The structure of Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1) also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1) (pdb code 7yr2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1), PDB code: 7yr2:

Chlorine binding site 1 out of 1 in 7yr2

Go back to Chlorine Binding Sites List in 7yr2
Chlorine binding site 1 out of 1 in the Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl902

b:168.3
occ:1.00
NH2 A:ARG169 3.0 184.6 1.0
CH2 A:TRP478 3.4 175.3 1.0
CZ3 A:TRP478 3.5 175.3 1.0
NE1 A:TRP477 3.6 175.4 1.0
CE A:LYS481 3.6 172.3 1.0
CZ A:ARG169 4.0 184.6 1.0
CZ2 A:TRP165 4.1 182.9 1.0
CZ2 A:TRP478 4.3 175.3 1.0
CD1 A:TRP477 4.4 175.4 1.0
CE3 A:TRP478 4.5 175.3 1.0
NZ A:LYS481 4.5 172.3 1.0
CD A:LYS481 4.5 172.3 1.0
NE A:ARG169 4.5 184.6 1.0
CE2 A:TRP477 4.5 175.4 1.0
CG A:LYS481 4.5 172.3 1.0
CH2 A:TRP165 4.6 182.9 1.0
NH1 A:ARG169 4.8 184.6 1.0
CZ2 A:TRP477 4.8 175.4 1.0
CB A:ALA264 5.0 176.9 1.0

Reference:

Y.Cao, W.Song, L.Wang, P.Liu, C.Yue, F.Jian, Y.Yu, A.Yisimayi, P.Wang, Y.Wang, Q.Zhu, J.Deng, W.Fu, L.Yu, N.Zhang, J.Wang, T.Xiao, R.An, J.Wang, L.Liu, S.Yang, X.Niu, Q.Gu, F.Shao, X.Hao, B.Meng, R.K.Gupta, R.Jin, Y.Wang, X.S.Xie, X.Wang. Characterization of the Enhanced Infectivity and Antibody Evasion of Omicron Ba.2.75. Cell Host Microbe V. 30 1527 2022.
ISSN: ESSN 1934-6069
PubMed: 36270286
DOI: 10.1016/J.CHOM.2022.09.018
Page generated: Tue Apr 4 22:19:32 2023

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