Chlorine in PDB 7zck: Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate

The structure of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate, PDB code: 7zck was solved by H.Mikolajek, B.S.Shah, I.T.Paulsen, J.Sandy, J.Sanchez-Weatherby, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	53.17 / 1.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	65.027, 40.683, 106.513, 90, 92.78, 90
R / Rfree (%)	15.1 / 19.7

The binding sites of Chlorine atom in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate (pdb code 7zck). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 9 binding sites of Chlorine where determined in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate, PDB code: 7zck:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Chlorine binding site 1 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl302 b:75.8 occ:1.00 OE1 C:GLU122 2.7 51.0 1.0 NH1 C:ARG128 3.1 33.5 1.0 CD C:GLU122 3.6 50.6 1.0 CG C:GLU122 3.7 39.2 1.0 CB C:GLU122 3.8 32.9 1.0 NH2 C:ARG128 3.8 34.5 1.0 NZ C:LYS270 3.9 62.7 1.0 CZ C:ARG128 3.9 33.3 1.0 CZ C:PHE152 4.4 36.1 1.0 CA C:GLU122 4.7 27.1 1.0 CE1 C:PHE152 4.7 30.4 1.0 CD C:LYS270 4.8 53.1 1.0 OE2 C:GLU122 4.8 53.5 1.0 CE2 C:PHE152 4.9 34.1 1.0 O C:GLU122 4.9 23.8 1.0 CE C:LYS270 5.0 59.7 1.0

Chlorine binding site 2 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl303 b:82.6 occ:1.00 CG C:GLN214 3.5 50.3 1.0 O C:HOH496 3.7 34.2 1.0 CA C:LYS211 3.7 35.1 1.0 N C:GLN214 3.8 26.0 1.0 CB C:ASP213 4.0 28.3 1.0 CB C:GLN214 4.3 38.2 1.0 C C:LYS211 4.3 31.7 1.0 CB C:LYS211 4.4 39.4 1.0 C C:ASP213 4.4 28.9 1.0 NE2 C:GLN214 4.4 65.2 1.0 N C:ASP213 4.4 25.3 1.0 O C:LYS211 4.4 32.9 1.0 CG C:LYS211 4.5 49.6 1.0 CA C:GLN214 4.5 33.3 1.0 CA C:ASP213 4.5 28.5 1.0 CD C:GLN214 4.5 60.6 1.0 N C:LYS211 4.6 34.3 1.0 O C:HOH409 4.8 49.5 1.0

Chlorine binding site 3 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl304 b:76.0 occ:1.00 N C:SER143 3.2 38.4 1.0 CB C:SER143 3.5 40.8 1.0 OG C:SER143 3.5 44.2 1.0 CD C:PRO142 3.5 35.4 1.0 CB C:THR141 3.6 41.5 1.0 N C:PRO142 3.6 36.8 1.0 OG1 C:THR141 3.7 40.9 1.0 CA C:SER143 3.9 42.5 1.0 C C:PRO142 4.0 38.3 1.0 CB C:PRO142 4.1 37.0 1.0 C C:THR141 4.1 36.3 1.0 CA C:PRO142 4.1 36.4 1.0 CG C:PRO142 4.2 36.2 1.0 CA C:THR141 4.3 37.3 1.0 CG2 C:THR141 4.7 43.6 1.0 O C:THR141 4.9 35.2 1.0

Chlorine binding site 4 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl305 b:73.2 occ:1.00 O C:HOH511 3.0 63.2 1.0 N C:ALA150 3.1 38.1 1.0 CB C:ARG149 3.4 43.7 1.0 CA C:ARG149 3.6 42.3 1.0 CB C:PRO142 3.8 37.0 1.0 C C:ARG149 3.9 39.1 1.0 O C:ALA150 3.9 36.8 1.0 CB C:ALA150 4.0 36.2 1.0 CA C:ALA150 4.0 36.2 1.0 CE2 C:PHE152 4.0 34.1 1.0 CZ C:PHE152 4.1 36.1 1.0 O C:HOH422 4.4 53.0 1.0 C C:ALA150 4.4 34.9 1.0 CG C:ARG149 4.6 50.7 1.0 CG C:PRO142 4.7 36.2 1.0

Chlorine binding site 5 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl306 b:59.8 occ:1.00 NH1 C:ARG31 2.9 40.6 1.0 O C:HOH434 3.0 33.6 1.0 CA C:ALA227 3.6 25.1 1.0 CB C:ARG31 3.7 30.4 1.0 CG C:ARG31 3.8 29.9 1.0 CD C:ARG31 3.8 35.1 1.0 CB C:ALA227 3.9 25.4 1.0 CZ C:ARG31 4.0 38.4 1.0 N C:ALA227 4.2 26.1 1.0 NE C:ARG31 4.3 34.1 1.0 O C:LYS226 4.6 27.2 1.0 O C:ARG31 4.6 33.8 1.0 C C:LYS226 4.6 25.6 1.0 CA C:ARG31 4.7 27.7 1.0 O C:HOH474 4.7 43.4 1.0 C C:ALA227 4.8 26.2 1.0 O C:ALA227 4.9 27.9 1.0 C C:ARG31 5.0 30.6 1.0

Chlorine binding site 6 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl307 b:103.0 occ:1.00 NH1 C:ARG37 2.6 58.1 0.5 CZ C:ARG37 3.6 52.7 0.5 NH1 C:ARG3 3.8 100.2 1.0 CB C:ARG3 3.8 42.4 1.0 NH2 C:ARG37 3.9 51.9 0.5 CD C:ARG3 4.0 73.3 1.0 CD C:LYS5 4.0 41.3 1.0 CG C:LYS5 4.4 34.8 1.0 CG C:ARG3 4.4 59.8 1.0 CZ C:ARG3 4.6 97.0 1.0 NZ C:LYS5 4.6 56.2 1.0 NE C:ARG3 4.7 87.3 1.0 CE C:LYS5 4.8 52.9 1.0 NE C:ARG37 4.8 48.1 0.5 CL C:CL308 4.9 77.5 1.0 O C:ARG3 4.9 28.1 1.0 CA C:ARG3 4.9 34.2 1.0

Chlorine binding site 7 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl308 b:77.5 occ:1.00 N C:ARG3 3.3 33.1 1.0 CA C:PRO2 3.4 40.5 1.0 NE C:ARG215 3.9 41.5 1.0 C C:PRO2 3.9 33.5 1.0 O C:ARG3 3.9 28.1 1.0 NH2 C:ARG215 3.9 37.9 1.0 CB C:PRO2 4.0 42.4 1.0 CZ C:ARG215 4.2 42.3 1.0 CA C:ARG3 4.4 34.2 1.0 O C:GLN1 4.6 36.5 1.0 N C:PRO2 4.6 40.1 1.0 C C:ARG3 4.6 31.2 1.0 CB C:ARG3 4.8 42.4 1.0 CL C:CL307 4.9 103.0 1.0 CD C:ARG215 4.9 40.0 1.0

Chlorine binding site 8 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl309 b:89.7 occ:1.00 OH C:TYR168 3.4 37.2 1.0 N C:GLY151 3.7 29.6 1.0 NE C:ARG149 3.8 77.7 1.0 O C:ARG149 3.8 36.7 1.0 C C:ALA150 3.8 34.9 1.0 O C:ALA150 3.9 36.8 1.0 CE2 C:TYR168 3.9 33.8 1.0 CG C:ARG149 3.9 50.7 1.0 O C:HOH468 4.0 31.4 1.0 CA C:GLY151 4.1 28.1 1.0 CZ C:TYR168 4.1 33.9 1.0 CD C:ARG149 4.3 64.7 1.0 C C:ARG149 4.4 39.1 1.0 CA C:ALA150 4.6 36.2 1.0 CZ C:ARG149 4.6 79.6 1.0 NH2 C:ARG149 4.6 82.7 1.0 N C:ALA150 4.8 38.1 1.0 O C:HOH422 4.8 53.0 1.0 O C:SER146 4.9 45.0 1.0

Chlorine binding site 9 out of 9 in the Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl310 b:103.5 occ:1.00 O C:HOH515 2.6 43.9 1.0 NE2 C:GLN72 3.2 36.5 1.0 CG C:GLN72 3.8 35.9 1.0 O C:GLN68 3.8 26.8 1.0 CA C:GLN68 3.9 24.8 1.0 CB C:LEU71 3.9 31.9 1.0 CD1 C:LEU71 4.0 36.5 1.0 CD C:GLN72 4.0 35.3 1.0 CB C:GLN68 4.1 26.2 1.0 CG C:GLN68 4.2 27.4 1.0 CG2 C:ILE271 4.3 39.0 1.0 C C:GLN68 4.3 26.3 1.0 CG C:LEU71 4.6 35.1 1.0 N C:GLN72 4.9 28.3 1.0

H.Mikolajek, B.S.Shah, I.T.Paulsen. Room Temperature Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate To Be Published.