Chlorine in PDB 7zy8: Crystal Structure of Compound 2 Bound to CK2ALPHA
Enzymatic activity of Crystal Structure of Compound 2 Bound to CK2ALPHA
All present enzymatic activity of Crystal Structure of Compound 2 Bound to CK2ALPHA:
2.7.11.1;
Protein crystallography data
The structure of Crystal Structure of Compound 2 Bound to CK2ALPHA, PDB code: 7zy8
was solved by
P.Brear,
C.Fusco,
E.Atkinson,
M.Rossmann,
N.Francis,
J.Iegre,
M.Hyvonen,
D.Spring,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
166.93 /
1.85
|
Space group
|
C 2 2 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
64.952,
67.966,
333.866,
90,
90,
90
|
R / Rfree (%)
|
19.6 /
21.9
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Compound 2 Bound to CK2ALPHA
(pdb code 7zy8). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of Compound 2 Bound to CK2ALPHA, PDB code: 7zy8:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7zy8
Go back to
Chlorine Binding Sites List in 7zy8
Chlorine binding site 1 out
of 4 in the Crystal Structure of Compound 2 Bound to CK2ALPHA
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Compound 2 Bound to CK2ALPHA within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl405
b:50.2
occ:1.00
|
CL1
|
B:KE0405
|
0.0
|
50.2
|
1.0
|
C7
|
B:KE0405
|
1.7
|
45.4
|
1.0
|
C6
|
B:KE0405
|
2.7
|
44.8
|
1.0
|
C8
|
B:KE0405
|
2.7
|
42.7
|
1.0
|
CD1
|
B:LEU128
|
3.6
|
43.6
|
1.0
|
CB
|
B:TYR136
|
3.9
|
19.6
|
1.0
|
CA
|
B:ILE133
|
3.9
|
21.5
|
1.0
|
C5
|
B:KE0405
|
4.0
|
48.1
|
1.0
|
C3
|
B:KE0405
|
4.0
|
41.3
|
1.0
|
CE
|
B:MET225
|
4.0
|
40.5
|
1.0
|
CD2
|
B:TYR136
|
4.1
|
21.1
|
1.0
|
CG1
|
B:ILE133
|
4.1
|
22.3
|
1.0
|
O
|
B:ASP132
|
4.4
|
25.5
|
1.0
|
CB
|
B:ILE133
|
4.4
|
23.4
|
1.0
|
CD2
|
B:LEU128
|
4.4
|
44.6
|
1.0
|
CG
|
B:TYR136
|
4.4
|
20.2
|
1.0
|
CG
|
B:MET225
|
4.5
|
34.2
|
1.0
|
N
|
B:ILE133
|
4.5
|
22.1
|
1.0
|
C4
|
B:KE0405
|
4.5
|
43.6
|
1.0
|
CG2
|
B:ILE133
|
4.6
|
23.4
|
1.0
|
O
|
B:ILE133
|
4.6
|
19.8
|
1.0
|
CD1
|
B:ILE164
|
4.6
|
30.3
|
1.0
|
CG
|
B:LEU128
|
4.6
|
42.4
|
1.0
|
C
|
B:ASP132
|
4.7
|
25.6
|
1.0
|
C
|
B:ILE133
|
4.8
|
23.6
|
1.0
|
SD
|
B:MET225
|
4.9
|
42.7
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7zy8
Go back to
Chlorine Binding Sites List in 7zy8
Chlorine binding site 2 out
of 4 in the Crystal Structure of Compound 2 Bound to CK2ALPHA
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Compound 2 Bound to CK2ALPHA within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl405
b:53.2
occ:1.00
|
CL
|
B:KE0405
|
0.0
|
53.2
|
1.0
|
C5
|
B:KE0405
|
1.8
|
48.1
|
1.0
|
C6
|
B:KE0405
|
2.7
|
44.8
|
1.0
|
C4
|
B:KE0405
|
2.7
|
43.6
|
1.0
|
CG2
|
B:ILE140
|
3.5
|
27.1
|
1.0
|
CB
|
B:ILE140
|
3.8
|
24.8
|
1.0
|
CD1
|
B:ILE140
|
3.9
|
44.3
|
1.0
|
CG1
|
B:VAL162
|
3.9
|
18.5
|
1.0
|
C7
|
B:KE0405
|
4.0
|
45.4
|
1.0
|
O
|
B:TYR136
|
4.0
|
19.4
|
1.0
|
C3
|
B:KE0405
|
4.0
|
41.3
|
1.0
|
CD1
|
B:LEU171
|
4.1
|
19.4
|
1.0
|
CE
|
B:MET221
|
4.2
|
32.6
|
1.0
|
SD
|
B:MET137
|
4.2
|
32.4
|
1.0
|
C
|
B:TYR136
|
4.3
|
22.4
|
1.0
|
CG1
|
B:ILE140
|
4.4
|
27.3
|
1.0
|
CA
|
B:MET137
|
4.5
|
20.8
|
1.0
|
C8
|
B:KE0405
|
4.5
|
42.7
|
1.0
|
N
|
B:MET137
|
4.5
|
21.3
|
1.0
|
CG2
|
B:VAL162
|
4.7
|
17.7
|
1.0
|
CB
|
B:VAL162
|
4.8
|
18.5
|
1.0
|
CB
|
B:TYR136
|
4.8
|
19.6
|
1.0
|
CD1
|
B:LEU218
|
4.8
|
22.1
|
1.0
|
SD
|
B:MET221
|
4.9
|
34.6
|
1.0
|
CG
|
B:MET137
|
4.9
|
26.9
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7zy8
Go back to
Chlorine Binding Sites List in 7zy8
Chlorine binding site 3 out
of 4 in the Crystal Structure of Compound 2 Bound to CK2ALPHA
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Compound 2 Bound to CK2ALPHA within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl406
b:44.6
occ:1.00
|
CL1
|
B:KE0406
|
0.0
|
44.6
|
1.0
|
C7
|
B:KE0406
|
1.7
|
40.4
|
1.0
|
C6
|
B:KE0406
|
2.7
|
37.3
|
1.0
|
C8
|
B:KE0406
|
2.7
|
39.4
|
1.0
|
CD1
|
B:ILE95
|
3.6
|
29.0
|
1.0
|
CH3
|
B:ACT401
|
3.7
|
29.3
|
1.0
|
CG1
|
B:VAL66
|
3.9
|
24.8
|
1.0
|
CB
|
B:VAL116
|
3.9
|
25.9
|
1.0
|
C5
|
B:KE0406
|
4.0
|
41.6
|
1.0
|
C3
|
B:KE0406
|
4.0
|
41.8
|
1.0
|
CG2
|
B:ILE174
|
4.0
|
16.6
|
1.0
|
CD1
|
B:ILE174
|
4.1
|
19.1
|
1.0
|
CG1
|
B:VAL116
|
4.2
|
24.0
|
1.0
|
CG2
|
B:VAL66
|
4.3
|
24.9
|
1.0
|
CG
|
B:MET163
|
4.3
|
25.5
|
1.0
|
CG2
|
B:VAL116
|
4.4
|
25.5
|
1.0
|
C4
|
B:KE0406
|
4.5
|
40.4
|
1.0
|
CB
|
B:VAL66
|
4.5
|
25.1
|
1.0
|
CB
|
B:ILE174
|
4.6
|
17.7
|
1.0
|
SD
|
B:MET163
|
4.8
|
28.1
|
1.0
|
CG1
|
B:ILE95
|
4.9
|
19.9
|
1.0
|
CG1
|
B:VAL53
|
4.9
|
22.3
|
1.0
|
CG1
|
B:ILE174
|
4.9
|
17.5
|
1.0
|
C
|
B:ACT401
|
5.0
|
31.0
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7zy8
Go back to
Chlorine Binding Sites List in 7zy8
Chlorine binding site 4 out
of 4 in the Crystal Structure of Compound 2 Bound to CK2ALPHA
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Compound 2 Bound to CK2ALPHA within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl406
b:50.9
occ:1.00
|
CL
|
B:KE0406
|
0.0
|
50.9
|
1.0
|
C5
|
B:KE0406
|
1.7
|
41.6
|
1.0
|
C6
|
B:KE0406
|
2.7
|
37.3
|
1.0
|
C4
|
B:KE0406
|
2.7
|
40.4
|
1.0
|
O
|
B:HOH616
|
3.3
|
45.6
|
1.0
|
O
|
B:HOH670
|
3.5
|
50.8
|
1.0
|
CB
|
B:ASN118
|
3.5
|
25.3
|
1.0
|
N
|
B:ASN118
|
3.7
|
26.4
|
1.0
|
O
|
B:VAL116
|
3.8
|
29.9
|
1.0
|
C7
|
B:KE0406
|
4.0
|
40.4
|
1.0
|
C3
|
B:KE0406
|
4.0
|
41.8
|
1.0
|
CD2
|
B:LEU45
|
4.1
|
36.1
|
1.0
|
C
|
B:ASN117
|
4.2
|
30.1
|
1.0
|
CA
|
B:ASN118
|
4.2
|
27.1
|
1.0
|
CD1
|
B:LEU45
|
4.4
|
30.4
|
1.0
|
CA
|
B:ASN117
|
4.4
|
26.8
|
1.0
|
C8
|
B:KE0406
|
4.5
|
39.4
|
1.0
|
SD
|
B:MET163
|
4.6
|
28.1
|
1.0
|
C
|
B:VAL116
|
4.6
|
28.6
|
1.0
|
CG
|
B:LEU45
|
4.7
|
31.1
|
1.0
|
CG
|
B:ASN118
|
4.7
|
32.6
|
1.0
|
O
|
B:ASN118
|
4.8
|
30.6
|
1.0
|
CB
|
B:LEU45
|
4.9
|
26.2
|
1.0
|
O
|
B:ASN117
|
4.9
|
28.8
|
1.0
|
N
|
B:ASN117
|
4.9
|
26.3
|
1.0
|
OD1
|
B:ASN118
|
5.0
|
31.4
|
1.0
|
|
Reference:
P.Brear,
C.Fusco,
E.Atkinson,
M.Rossmann,
N.Francis,
J.Iegre,
M.Hyvonen,
D.Spring.
Crystal Structure of Compound 2 Bound to CK2ALPHA To Be Published.
Page generated: Tue Jul 30 06:22:43 2024
|