Chlorine in PDB 8a1a: Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct

Protein crystallography data

The structure of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct, PDB code: 8a1a was solved by P.R.E.Mittl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.28 / 2.05
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 191.866, 191.866, 122.409, 90, 90, 120
R / Rfree (%) 16.1 / 18.5

Other elements in 8a1a:

The structure of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct also contains other interesting chemical elements:

Fluorine (F) 1 atom
Manganese (Mn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct (pdb code 8a1a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct, PDB code: 8a1a:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8a1a

Go back to Chlorine Binding Sites List in 8a1a
Chlorine binding site 1 out of 4 in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1710

b:89.3
occ:1.00
OD2 A:ASP1003 4.3 46.5 1.0
C A:GLY1002 4.4 35.6 1.0
O A:THR1001 4.4 38.1 1.0
CA A:GLY1002 4.4 35.8 1.0
CG A:ASP1003 4.4 42.2 1.0
CB A:ASP1003 4.5 35.9 1.0
N A:ASP1003 4.5 34.4 1.0
O A:HOH1901 4.7 53.7 1.0
O A:GLY1002 4.8 36.2 1.0
CB A:VAL992 4.9 30.4 1.0

Chlorine binding site 2 out of 4 in 8a1a

Go back to Chlorine Binding Sites List in 8a1a
Chlorine binding site 2 out of 4 in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1711

b:63.6
occ:1.00
O A:HOH2557 3.8 79.4 1.0
CD A:ARG1168 3.9 41.8 1.0
CD A:LYS1191 3.9 53.0 1.0
O A:HOH2225 4.0 51.5 1.0
CG A:LYS1191 4.0 48.0 1.0
O A:SER1192 4.2 38.7 1.0
CZ A:TYR1215 4.4 37.3 1.0
CE1 A:TYR1215 4.4 36.5 1.0
CE A:LYS1191 4.5 58.7 1.0
O A:HOH2470 4.6 57.4 1.0
OH A:TYR1215 4.6 39.0 1.0
NE A:ARG1168 4.7 43.5 1.0
CA A:ARG1168 4.8 41.3 1.0
CE2 A:TYR1215 4.8 36.6 1.0
CD1 A:TYR1215 4.8 35.8 1.0
O A:ASN1167 4.9 38.0 1.0
O A:HOH2523 4.9 63.7 1.0

Chlorine binding site 3 out of 4 in 8a1a

Go back to Chlorine Binding Sites List in 8a1a
Chlorine binding site 3 out of 4 in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1712

b:52.7
occ:1.00
O A:HOH2286 3.5 36.0 1.0
CE1 A:PHE1222 3.7 43.1 1.0
CZ A:PHE1222 3.7 42.8 1.0
O A:ASN1277 3.8 36.6 1.0
CE2 A:TYR1220 4.0 37.1 1.0
N A:ALA1279 4.0 34.2 1.0
CB A:TYR1257 4.1 39.0 1.0
CG A:TYR1257 4.2 37.5 1.0
OD1 A:ASN1255 4.2 44.3 1.0
CD2 A:TYR1220 4.3 36.0 1.0
CD2 A:TYR1257 4.3 37.5 1.0
CA A:ASN1278 4.3 34.7 1.0
CE3 A:TRP1283 4.4 35.8 1.0
ND2 A:ASN1255 4.4 43.6 1.0
CD2 A:TRP1283 4.5 35.3 1.0
CZ A:TYR1220 4.6 38.1 1.0
CB A:ALA1279 4.6 34.3 1.0
CG A:ASN1255 4.6 42.9 1.0
OD1 A:ASN1278 4.6 41.0 1.0
C A:ASN1277 4.7 36.5 1.0
C A:ASN1278 4.7 34.7 1.0
CZ3 A:TRP1283 4.8 36.2 1.0
CD1 A:TYR1257 4.8 38.0 1.0
OH A:TYR1220 4.9 39.7 1.0
N A:ASN1278 4.9 35.4 1.0
CG A:TRP1283 4.9 35.6 1.0
CA A:ALA1279 5.0 34.5 1.0

Chlorine binding site 4 out of 4 in 8a1a

Go back to Chlorine Binding Sites List in 8a1a
Chlorine binding site 4 out of 4 in the Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of A Leucinostatin Derivative Determined By Host Lattice Display : L1F11V1 Construct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1713

b:106.7
occ:1.00
O A:HOH3028 3.2 56.6 1.0
O A:SER972 3.8 41.4 1.0
N A:ALA974 4.3 39.0 1.0
CA A:ALA974 4.4 38.5 1.0
C A:SER973 4.6 39.4 1.0
C A:SER972 4.6 40.6 1.0
CB A:ALA974 4.6 38.4 1.0
O A:SER973 4.8 38.8 1.0

Reference:

C.Kiss, F.M.Gall, B.Dreier, M.Adams, R.Riedl, A.Pluckthun, P.R.E.Mittl. Structure of A Hydrophobic Leucinostatin Derivative Determined By Host Lattice Display. Acta Crystallogr D Struct V. 78 1439 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 36458615
DOI: 10.1107/S2059798322010762
Page generated: Tue Jul 30 06:25:10 2024

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