Chlorine in PDB 8aau: Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3

Enzymatic activity of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3

All present enzymatic activity of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3:
2.7.11.1;

Protein crystallography data

The structure of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3, PDB code: 8aau was solved by S.Mathea, E.Salah, T.Hanke, S.Knapp, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.71 / 1.74
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 85.668, 85.668, 182.108, 90, 90, 120
R / Rfree (%) 21.1 / 24

Other elements in 8aau:

The structure of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Fluorine (F) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 (pdb code 8aau). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3, PDB code: 8aau:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8aau

Go back to Chlorine Binding Sites List in 8aau
Chlorine binding site 1 out of 2 in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl702

b:39.4
occ:1.00
CL L:LH0702 0.0 39.4 1.0
C L:LH0702 1.7 39.1 1.0
C5 L:LH0702 2.7 39.2 1.0
C1 L:LH0702 2.7 36.8 1.0
N L:LH0702 3.0 34.0 1.0
CB L:ALA477 3.3 29.3 1.0
C9 L:LH0702 3.7 33.3 1.0
N1 L:LH0702 3.7 37.5 1.0
N L:ASP478 3.8 32.9 1.0
C4 L:LH0702 4.0 42.9 1.0
C2 L:LH0702 4.0 40.8 1.0
C10 L:LH0702 4.0 33.2 1.0
CB L:ASP478 4.0 35.2 1.0
CD1 L:LEU467 4.1 31.9 1.0
C L:ALA477 4.1 32.3 1.0
OD1 L:ASN465 4.2 34.7 1.0
O L:HOH865 4.2 41.4 1.0
S L:LH0702 4.3 34.5 1.0
CA L:ASP478 4.3 34.1 1.0
CD2 L:LEU467 4.3 35.3 1.0
CA L:ALA477 4.3 30.4 1.0
CG L:LEU467 4.4 35.0 1.0
C6 L:LH0702 4.5 35.0 1.0
C3 L:LH0702 4.5 42.9 1.0
C8 L:LH0702 4.5 36.0 1.0
CA L:ASN465 4.7 30.2 1.0
O L:ASN465 4.8 32.4 1.0
O L:ALA477 4.8 31.6 1.0
CG L:ASN465 4.9 34.6 1.0
C11 L:LH0702 5.0 32.3 1.0

Chlorine binding site 2 out of 2 in 8aau

Go back to Chlorine Binding Sites List in 8aau
Chlorine binding site 2 out of 2 in the Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl702

b:48.5
occ:1.00
CL1 L:LH0702 0.0 48.5 1.0
C2 L:LH0702 1.7 40.8 1.0
C1 L:LH0702 2.7 36.8 1.0
C3 L:LH0702 2.7 42.9 1.0
N L:LH0702 3.0 34.0 1.0
N1 L:LH0702 3.4 37.5 1.0
CB L:ALA353 3.4 42.7 1.0
CB L:LEU345 3.6 45.3 1.0
C L:LEU345 3.6 45.4 1.0
O L:LEU345 3.6 48.0 1.0
C9 L:LH0702 3.7 33.3 1.0
N L:GLY346 3.7 48.0 1.0
CA L:GLY346 3.9 50.5 1.0
C L:LH0702 4.0 39.1 1.0
C4 L:LH0702 4.0 42.9 1.0
S L:LH0702 4.1 34.5 1.0
C6 L:LH0702 4.1 35.0 1.0
C10 L:LH0702 4.2 33.2 1.0
CA L:LEU345 4.3 45.8 1.0
C8 L:LH0702 4.4 36.0 1.0
C5 L:LH0702 4.5 39.2 1.0
CA L:ALA353 4.8 43.3 1.0
CD1 L:LEU345 4.8 40.2 1.0
O L:ALA353 4.8 44.9 1.0
CG1 L:VAL366 4.8 37.1 1.0
CG L:LEU345 4.8 46.9 1.0
C L:GLY346 4.9 51.4 1.0
C L:ALA353 5.0 45.6 1.0

Reference:

S.Mathea, E.Salah, T.Hanke, S.Knapp. Lim Domain Kinase 1 (LIMK1) Bound to LIMKI3 To Be Published.
Page generated: Tue Jul 30 06:33:16 2024

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