Chlorine in PDB 8ab7: Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound

All present enzymatic activity of Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound:
7.1.1.8;

The structure of Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound also contains other interesting chemical elements:

Iron

(Fe)

10 atoms

The binding sites of Chlorine atom in the Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound (pdb code 8ab7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound, PDB code: 8ab7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl508 b:170.0 occ:1.00 CL C:AOQ508 0.0 170.0 1.0 C20 C:AOQ508 1.8 128.0 1.0 CD1 C:ILE299 2.6 86.9 1.0 C21 C:AOQ508 2.7 112.9 1.0 C19 C:AOQ508 2.8 107.1 1.0 CD2 C:LEU122 3.2 75.5 1.0 CG1 C:ILE299 3.7 76.0 1.0 C18 C:AOQ508 4.0 91.3 1.0 C22 C:AOQ508 4.1 86.4 1.0 CB C:ILE299 4.1 66.9 1.0 CA C:VAL296 4.2 80.1 1.0 CD1 C:ILE125 4.2 48.9 1.0 O C:MET295 4.3 92.9 1.0 C17 C:AOQ508 4.5 74.8 1.0 CG C:LEU122 4.5 67.4 1.0 CG2 C:VAL296 4.6 108.7 1.0 O C:VAL296 4.7 74.3 1.0 CG2 C:ILE299 4.7 69.7 1.0 CG2 C:ILE125 4.8 40.8 1.0 CB C:VAL296 4.8 93.7 1.0 C C:MET295 4.9 82.1 1.0 N C:VAL296 4.9 79.6 1.0 CG1 C:VAL296 4.9 108.5 1.0 C C:VAL296 5.0 72.5 1.0

Chlorine binding site 2 out of 2 in the Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex III2 From Yarrowia Lipolytica, Atovaquone and Antimycin A Bound within 5.0Å range: probe atom residue distance (Å) B Occ N:Cl509 b:215.3 occ:1.00 CL N:AOQ509 0.0 215.3 1.0 C20 N:AOQ509 1.8 157.9 1.0 CD1 N:ILE299 2.4 90.5 1.0 CD2 N:LEU122 2.7 76.4 1.0 C19 N:AOQ509 2.7 130.5 1.0 C21 N:AOQ509 2.8 136.2 1.0 CG1 N:ILE299 3.7 77.4 1.0 CD1 N:ILE125 3.8 48.2 1.0 CG N:LEU122 3.9 67.4 1.0 C18 N:AOQ509 4.0 101.7 1.0 CB N:ILE299 4.0 67.9 1.0 C22 N:AOQ509 4.0 98.1 1.0 CG2 N:ILE299 4.3 70.8 1.0 C17 N:AOQ509 4.5 84.1 1.0 CG2 N:ILE125 4.5 40.2 1.0 CA N:LEU122 4.7 47.0 1.0 CB N:LEU122 4.7 56.0 1.0 CB N:ILE125 4.8 38.7 1.0 CA N:VAL296 4.9 81.8 1.0 CG1 N:ILE125 4.9 43.0 1.0 CD1 N:LEU122 5.0 89.0 1.0

J.P.Wieferig, W.Kuhlbrandt. Analysis of the Conformational Heterogeneity of the Rieske Iron-Sulfur Protein in Complex III2 By Cryo-Em Iucrj 2023.
ISSN: ESSN 2052-2525