Chlorine in PDB 8am4: Cl-RSEGFP2 Long Wavelength Structure

Protein crystallography data

The structure of Cl-RSEGFP2 Long Wavelength Structure, PDB code: 8am4 was solved by C.M.Orr, A.Fadini, J.Van Thor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.11 / 2.02
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.915, 63.25, 70.587, 90, 90, 90
R / Rfree (%) 19.6 / 25.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cl-RSEGFP2 Long Wavelength Structure (pdb code 8am4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Cl-RSEGFP2 Long Wavelength Structure, PDB code: 8am4:

Chlorine binding site 1 out of 1 in 8am4

Go back to Chlorine Binding Sites List in 8am4
Chlorine binding site 1 out of 1 in the Cl-RSEGFP2 Long Wavelength Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cl-RSEGFP2 Long Wavelength Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl79

b:60.3
occ:0.92
CL A:OHD79 0.0 60.3 0.9
CE2 A:OHD79 1.8 29.8 0.9
CD2 A:OHD79 2.8 31.4 0.9
CZ A:OHD79 2.9 33.5 0.9
OH A:OHD79 3.1 39.5 0.9
ND1 A:HIS160 3.2 37.0 1.0
CB A:HIS160 3.4 35.0 1.0
CD1 A:ILE179 3.4 33.0 1.0
CG1 A:VAL162 3.5 41.4 1.0
OG1 A:THR215 3.6 36.8 1.0
CG A:HIS160 3.6 36.3 1.0
CG2 A:THR215 3.8 34.4 1.0
CE2 A:PHE177 4.0 29.2 1.0
CG2 A:OHD79 4.1 31.3 0.9
CE1 A:OHD79 4.1 37.0 0.9
CB A:THR215 4.2 31.4 1.0
CD2 A:PHE177 4.2 31.3 1.0
CE1 A:HIS160 4.2 39.8 1.0
CD1 A:OHD79 4.6 35.0 0.9
CG1 A:ILE179 4.7 41.5 1.0
CA A:HIS160 4.7 38.8 1.0
CZ A:PHE177 4.7 25.9 1.0
CD2 A:HIS160 4.7 39.8 1.0
CG2 A:THR76 4.8 31.0 1.0
C A:HIS160 5.0 37.5 1.0
CB A:VAL162 5.0 38.0 1.0

Reference:

A.Fadini, C.D.M.Hutchison, D.Morozov, J.Chang, K.Maghlaoui, S.Perrett, F.Luo, J.C.X.Kho, M.G.Romei, R.M.L.Morgan, C.M.Orr, V.Cordon-Preciado, T.Fujiwara, N.Nuemket, T.Tosha, R.Tanaka, S.Owada, K.Tono, S.Iwata, S.G.Boxer, G.Groenhof, E.Nango, J.J.Van Thor. Serial Femtosecond Crystallography Reveals That Photoactivation in A Fluorescent Protein Proceeds Via the Hula Twist Mechanism. J.Am.Chem.Soc. 2023.
ISSN: ESSN 1520-5126
PubMed: 37418747
DOI: 10.1021/JACS.3C02313
Page generated: Tue Jul 30 06:41:07 2024

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