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Chlorine in PDB 8b9x: Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1

Protein crystallography data

The structure of Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1, PDB code: 8b9x was solved by R.Wiener, M.Isupov, S.Banerjee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.11 / 3.07
Space group P 64
Cell size a, b, c (Å), α, β, γ (°) 145.568, 145.568, 83.175, 90, 90, 120
R / Rfree (%) 23.3 / 27.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1 (pdb code 8b9x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1, PDB code: 8b9x:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8b9x

Go back to Chlorine Binding Sites List in 8b9x
Chlorine binding site 1 out of 2 in the Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:120.1
occ:1.00
NH1 A:ARG169 3.9 72.3 0.5
ND1 A:HIS165 4.0 102.5 1.0
CE1 A:HIS165 4.2 105.4 1.0
OD1 A:ASN168 4.4 89.8 1.0
CG1 A:VAL121 4.6 94.7 1.0

Chlorine binding site 2 out of 2 in 8b9x

Go back to Chlorine Binding Sites List in 8b9x
Chlorine binding site 2 out of 2 in the Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:125.5
occ:1.00
ND1 B:HIS165 3.8 109.1 1.0
NH1 B:ARG169 4.0 70.9 0.5
CE1 B:HIS165 4.2 117.5 1.0
OD1 B:ASN168 4.3 103.1 1.0
CG1 B:VAL121 4.4 108.8 1.0
OE2 B:GLU119 5.0 149.7 1.0

Reference:

R.Wiener, M.Isupov. Chimeric Protein of Human UFM1 E3 Ligase, UFL1, and DDRGK1 To Be Published.
Page generated: Thu Dec 28 03:02:51 2023

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