Chlorine in PDB 8bje: A Structure of the Truncated Lpmip with Bound Inhibitor JK236.

Enzymatic activity of A Structure of the Truncated Lpmip with Bound Inhibitor JK236.

All present enzymatic activity of A Structure of the Truncated Lpmip with Bound Inhibitor JK236.:
5.2.1.8;

Protein crystallography data

The structure of A Structure of the Truncated Lpmip with Bound Inhibitor JK236., PDB code: 8bje was solved by J.J.Whittaker, A.Guskov, B.Goretzki, U.A.Hellmich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.86 / 1.49
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 52.951, 52.951, 73.146, 90, 90, 120
R / Rfree (%) 19.8 / 23.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Structure of the Truncated Lpmip with Bound Inhibitor JK236. (pdb code 8bje). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the A Structure of the Truncated Lpmip with Bound Inhibitor JK236., PDB code: 8bje:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8bje

Go back to Chlorine Binding Sites List in 8bje
Chlorine binding site 1 out of 2 in the A Structure of the Truncated Lpmip with Bound Inhibitor JK236.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Structure of the Truncated Lpmip with Bound Inhibitor JK236. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:28.9
occ:1.00
CL1 A:WRL203 0.0 28.9 1.0
C1 A:WRL203 1.7 26.9 1.0
C2 A:WRL203 2.7 25.1 1.0
C22 A:WRL203 2.7 26.6 1.0
OD2 A:ASP65 3.7 25.2 1.0
CG A:ASP65 3.7 23.1 1.0
OD1 A:ASP65 4.0 23.0 1.0
C21 A:WRL203 4.0 26.7 1.0
C3 A:WRL203 4.0 24.2 1.0
CB A:ASP65 4.1 22.4 1.0
O A:PHE64 4.4 22.1 1.0
C20 A:WRL203 4.5 25.0 1.0
O A:HOH301 4.8 26.5 1.0

Chlorine binding site 2 out of 2 in 8bje

Go back to Chlorine Binding Sites List in 8bje
Chlorine binding site 2 out of 2 in the A Structure of the Truncated Lpmip with Bound Inhibitor JK236.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A Structure of the Truncated Lpmip with Bound Inhibitor JK236. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:28.6
occ:1.00
CL2 A:WRL203 0.0 28.6 1.0
C21 A:WRL203 1.7 26.7 1.0
C20 A:WRL203 2.7 25.0 1.0
C22 A:WRL203 2.7 26.6 1.0
NH1 A:ARG111 3.3 67.4 1.0
C15 A:WRL203 3.7 21.5 1.0
CG1 A:ILE117 3.9 31.2 1.0
C1 A:WRL203 4.0 26.9 1.0
C3 A:WRL203 4.0 24.2 1.0
CZ A:TYR108 4.1 21.1 1.0
OH A:TYR108 4.1 21.1 1.0
CG A:PRO116 4.2 45.2 1.0
N3 A:WRL203 4.2 21.1 1.0
CE2 A:TYR108 4.3 20.5 1.0
CE1 A:TYR108 4.4 21.8 1.0
O A:HOH303 4.4 46.4 1.0
C16 A:WRL203 4.4 21.2 1.0
C2 A:WRL203 4.5 25.1 1.0
CZ A:ARG111 4.5 67.8 1.0
CB A:ILE117 4.7 30.5 1.0
CD2 A:TYR108 4.9 20.5 1.0
CD1 A:TYR108 4.9 22.5 1.0
CD1 A:ILE117 5.0 31.8 1.0

Reference:

C.Wiedemann, J.J.Whittaker, V.H.P.Carrillo, B.Goretzki, M.Dajka, F.Tebbe, J.M.Harder, P.R.Krajczy, B.Joseph, F.Hausch, A.Guskov, U.A.Hellmich. Legionella Pneumophila Macrophage Infectivity Potentiator Protein Appendage Domains Modulate Protein Dynamics and Inhibitor Binding. Int.J.Biol.Macromol. 26366 2023.
ISSN: ISSN 0141-8130
PubMed: 37633566
DOI: 10.1016/J.IJBIOMAC.2023.126366
Page generated: Tue Jul 30 07:17:25 2024

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