Chlorine in PDB 8bxt: Structure of Staygold

Protein crystallography data

The structure of Structure of Staygold, PDB code: 8bxt was solved by E.Ivorra-Molla, D.Akhuli, A.Crow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.66 / 1.60
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 133.721, 133.721, 58.533, 90, 90, 120
R / Rfree (%) 16.3 / 18.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Staygold (pdb code 8bxt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Staygold, PDB code: 8bxt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8bxt

Go back to Chlorine Binding Sites List in 8bxt
Chlorine binding site 1 out of 2 in the Structure of Staygold


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Staygold within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:15.2
occ:0.99
O A:HOH439 3.0 13.6 1.0
NZ A:LYS61 3.0 17.8 1.0
NH2 A:ARG86 3.4 11.1 1.0
NZ A:LYS192 3.6 17.1 1.0
CE A:LYS61 3.6 15.3 1.0
OG1 A:THR172 3.8 12.6 1.0
CB A:CYS150 3.9 12.8 1.0
CD2 A:CR258 4.0 11.9 1.0
NE2 A:GLN170 4.0 10.8 1.0
CB2 A:CR258 4.1 14.5 1.0
CG1 A:VAL139 4.1 11.4 1.0
CB A:THR172 4.1 12.7 1.0
SG A:CYS150 4.3 14.9 1.0
O2 A:CR258 4.4 10.5 1.0
CG2 A:THR172 4.5 13.0 1.0
CG2 A:CR258 4.6 11.8 1.0
CZ A:ARG86 4.6 11.1 1.0
CE A:LYS192 4.7 14.1 1.0
OH A:TYR84 4.9 12.2 1.0
O A:CYS150 4.9 12.4 1.0
CE2 A:CR258 5.0 12.5 1.0

Chlorine binding site 2 out of 2 in 8bxt

Go back to Chlorine Binding Sites List in 8bxt
Chlorine binding site 2 out of 2 in the Structure of Staygold


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Staygold within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:15.4
occ:0.99
O B:HOH433 3.0 13.4 1.0
NZ B:LYS61 3.1 17.7 1.0
NH1 B:ARG86 3.4 9.9 1.0
NZ B:LYS192 3.6 18.4 1.0
CE B:LYS61 3.7 15.9 1.0
OG1 B:THR172 3.8 13.3 1.0
CB B:CYS150 3.9 12.1 1.0
CD1 B:CR258 4.0 13.3 1.0
NE2 B:GLN170 4.0 10.8 1.0
CG1 B:VAL139 4.1 13.3 1.0
CB B:THR172 4.1 13.0 1.0
CB2 B:CR258 4.1 14.1 1.0
SG B:CYS150 4.4 14.7 1.0
O2 B:CR258 4.4 10.3 1.0
CG2 B:THR172 4.5 13.0 1.0
CZ B:ARG86 4.6 11.1 1.0
CG2 B:CR258 4.6 12.7 1.0
CE B:LYS192 4.6 14.6 1.0
OH B:TYR84 4.9 12.5 1.0
O B:CYS150 4.9 13.0 1.0
CE1 B:CR258 5.0 12.9 1.0

Reference:

E.Ivorra-Molla, D.Akhuli, M.Mcandrew, W.Scott, L.Kumar, S.Palani, M.Mishima, A.Crow, M.Balasubramanian. A Monomeric Staygold Fluorescent Protein Preprints 2023.
ISSN: ESSN 2310-287X
DOI: 10.21203/RS.3.RS-2684100/V1
Page generated: Wed Jul 26 15:46:34 2023

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