Chlorine in PDB 8c1p: Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3

The binding sites of Chlorine atom in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3 (pdb code 8c1p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3, PDB code: 8c1p:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1401 b:180.6 occ:1.00 CL A:CYZ1401 0.0 180.6 1.0 C13 A:CYZ1401 1.7 91.5 1.0 C14 A:CYZ1401 2.6 86.7 1.0 C12 A:CYZ1401 2.7 89.3 1.0 N3 A:CYZ1401 2.9 104.1 1.0 N A:ASP756 3.2 109.4 1.0 S2 A:CYZ1401 3.3 95.1 1.0 O4 A:CYZ1401 3.5 110.8 1.0 CB A:LEU755 3.5 95.2 1.0 C A:LEU755 3.5 92.9 1.0 CA A:ASP756 3.5 128.7 1.0 O A:LEU755 3.9 88.6 1.0 CB A:ASP756 3.9 156.1 1.0 C10 A:CYZ1401 4.0 84.2 1.0 C11 A:CYZ1401 4.0 89.3 1.0 CA A:LEU755 4.1 97.2 1.0 C9 A:CYZ1401 4.4 81.7 1.0 O3 A:CYZ1401 4.6 86.4 1.0 OD1 A:ASP756 4.7 197.4 1.0 CG A:LEU755 4.7 92.2 1.0 CD1 A:LEU755 4.8 90.2 1.0 CG A:ASP756 4.9 184.8 1.0 C A:ASP756 4.9 123.4 1.0 CB D:SER725 5.0 95.1 1.0 N A:LEU755 5.0 99.4 1.0 O A:PHE491 5.0 83.3 1.0

Chlorine binding site 2 out of 4 in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1401 b:158.1 occ:1.00 CL B:CYZ1401 0.0 158.1 1.0 C13 B:CYZ1401 1.7 94.8 1.0 C14 B:CYZ1401 2.6 90.9 1.0 C12 B:CYZ1401 2.7 95.4 1.0 N3 B:CYZ1401 2.9 93.4 1.0 OD1 B:ASP756 3.1 171.2 1.0 N B:ASP756 3.2 84.2 1.0 CG B:ASP756 3.3 160.7 1.0 S2 B:CYZ1401 3.3 93.4 1.0 CB B:LEU755 3.5 77.5 1.0 C B:LEU755 3.5 95.2 1.0 O4 B:CYZ1401 3.5 104.3 1.0 OD2 B:ASP756 3.6 162.1 1.0 CA B:ASP756 3.6 103.5 1.0 OG C:SER725 3.7 102.0 1.0 O B:LEU755 3.9 90.0 1.0 C10 B:CYZ1401 4.0 83.5 1.0 CB B:ASP756 4.0 126.7 1.0 C11 B:CYZ1401 4.0 78.8 1.0 CA B:LEU755 4.1 90.4 1.0 C9 B:CYZ1401 4.5 72.8 1.0 O3 B:CYZ1401 4.6 92.5 1.0 CG B:LEU755 4.8 75.9 1.0 CD1 B:LEU755 4.8 78.3 1.0 O B:PHE491 4.9 76.0 1.0 C B:ASP756 5.0 105.3 1.0 N B:LEU755 5.0 101.4 1.0

Chlorine binding site 3 out of 4 in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1401 b:165.5 occ:1.00 CL C:CYZ1401 0.0 165.5 1.0 C13 C:CYZ1401 1.7 91.2 1.0 C14 C:CYZ1401 2.6 81.2 1.0 C12 C:CYZ1401 2.7 86.9 1.0 N3 C:CYZ1401 2.9 114.2 1.0 N C:ASP756 3.2 98.9 1.0 S2 C:CYZ1401 3.3 95.3 1.0 CB C:LEU755 3.5 99.8 1.0 CA C:ASP756 3.5 110.5 1.0 C C:LEU755 3.5 90.4 1.0 O4 C:CYZ1401 3.6 118.3 1.0 CB C:ASP756 3.9 131.9 1.0 O C:LEU755 4.0 76.5 1.0 C10 C:CYZ1401 4.0 76.4 1.0 C11 C:CYZ1401 4.0 81.7 1.0 CA C:LEU755 4.1 97.4 1.0 C9 C:CYZ1401 4.5 73.5 1.0 O3 C:CYZ1401 4.6 99.4 1.0 CG C:LEU755 4.7 95.1 1.0 CD1 C:LEU755 4.8 91.0 1.0 CG C:ASP756 4.9 165.4 1.0 CB B:SER725 4.9 84.6 1.0 C C:ASP756 4.9 112.0 1.0 O C:PHE491 4.9 88.0 1.0 N C:LEU755 5.0 102.5 1.0

Chlorine binding site 4 out of 4 in the Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Active State Homomeric GLUA1 Ampa Receptor in Complex with Tarp Gamma 3 within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl1401 b:176.2 occ:1.00 CL D:CYZ1401 0.0 176.2 1.0 C13 D:CYZ1401 1.7 99.5 1.0 C14 D:CYZ1401 2.6 87.0 1.0 C12 D:CYZ1401 2.7 99.6 1.0 N3 D:CYZ1401 2.9 129.7 1.0 OD1 D:ASP756 3.1 175.6 1.0 N D:ASP756 3.2 95.4 1.0 S2 D:CYZ1401 3.3 109.4 1.0 CG D:ASP756 3.3 164.1 1.0 CB D:LEU755 3.5 79.5 1.0 C D:LEU755 3.5 99.0 1.0 O3 D:CYZ1401 3.5 107.3 1.0 CA D:ASP756 3.5 111.5 1.0 OD2 D:ASP756 3.6 170.9 1.0 O D:LEU755 4.0 110.6 1.0 C10 D:CYZ1401 4.0 79.5 1.0 CB D:ASP756 4.0 129.4 1.0 C11 D:CYZ1401 4.0 90.1 1.0 CA D:LEU755 4.1 89.2 1.0 C9 D:CYZ1401 4.5 78.3 1.0 O4 D:CYZ1401 4.6 105.1 1.0 CG D:LEU755 4.8 83.3 1.0 CD1 D:LEU755 4.8 81.6 1.0 CB A:SER725 4.8 94.0 1.0 N D:LEU755 4.9 108.4 1.0 OG A:SER725 4.9 104.5 1.0 C D:ASP756 5.0 122.5 1.0 O D:PHE491 5.0 94.7 1.0

D.Zhang, J.Ivica, J.M.Krieger, H.Ho, K.Yamashita, O.Cais, I.Greger. Ntd Dynamics Dictate Gating Routes in A Homomeric GLUA1 Ampa Receptor Complex To Be Published.