Chlorine in PDB 8c3f: Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv

Protein crystallography data

The structure of Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv, PDB code: 8c3f was solved by A.G.Gabdulkhakov, G.K.Selikhanov, T.Y.Fufina, L.G.Vasilieva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.12 / 2.60
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 139.346, 139.346, 184.574, 90, 90, 120
R / Rfree (%) 19.4 / 22

Other elements in 8c3f:

The structure of Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv also contains other interesting chemical elements:

Potassium (K) 2 atoms
Magnesium (Mg) 4 atoms
Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv (pdb code 8c3f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv, PDB code: 8c3f:

Chlorine binding site 1 out of 1 in 8c3f

Go back to Chlorine Binding Sites List in 8c3f
Chlorine binding site 1 out of 1 in the Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Double Mutant I(L177)H/F(M197)H Structure of Photosynthetic Reaction Center From Cereibacter Sphaeroides Strain Rv within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Cl412

b:70.9
occ:1.00
NE1 M:TRP271 3.1 62.4 1.0
NH1 M:ARG267 3.1 53.9 1.0
OH H:TYR30 3.2 64.1 1.0
CE2 H:TYR30 3.5 61.6 1.0
CD M:ARG267 3.6 52.4 1.0
OA7 M:CDL414 3.7 92.8 1.0
CD1 M:TRP271 3.7 59.7 1.0
CZ H:TYR30 3.8 63.4 1.0
OB9 M:CDL414 4.0 93.0 1.0
CB M:ARG267 4.0 51.9 1.0
CG M:ARG267 4.0 49.1 1.0
CA5 M:CDL414 4.1 96.0 1.0
CZ M:ARG267 4.1 57.3 1.0
CE2 M:TRP271 4.2 62.6 1.0
NE M:ARG267 4.3 56.3 1.0
C11 M:CDL414 4.5 83.7 1.0
OA3 M:CDL414 4.6 87.8 1.0
C12 M:CDL414 4.6 78.3 1.0
CA M:ARG267 4.7 50.6 1.0
CD2 H:TYR30 4.7 56.3 1.0
CZ2 M:TRP271 4.8 68.0 1.0
OA6 M:CDL414 4.8 99.7 1.0
CG2 M:ILE270 4.8 51.3 1.0
CD2 H:LEU31 4.8 47.8 1.0
C72 M:CDL414 4.9 87.9 1.0
CD1 L:LEU195 5.0 55.3 1.0

Reference:

T.Y.Fufina, G.K.Selikhanov, A.G.Gabdulkhakov, L.G.Vasilieva. Properties and Crystal Structure of the Cereibacter Sphaeroides Photosynthetic Reaction Center with Double Amino Acid Substitution I(L177)H + F(M197)H. Membranes (Basel) V. 13 2023.
ISSN: ESSN 2077-0375
PubMed: 36837660
DOI: 10.3390/MEMBRANES13020157
Page generated: Tue Jul 30 07:38:08 2024

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