Chlorine in PDB 8c7y: Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6

Enzymatic activity of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6

All present enzymatic activity of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6, PDB code: 8c7y was solved by A.Chaikuad, P.Bonnet, S.Knapp, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 74.55 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.269, 97.739, 115.279, 90, 90, 90
R / Rfree (%) 15.2 / 17.5

Other elements in 8c7y:

The structure of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6 also contains other interesting chemical elements:

Fluorine (F) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6 (pdb code 8c7y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6, PDB code: 8c7y:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8c7y

Go back to Chlorine Binding Sites List in 8c7y
Chlorine binding site 1 out of 2 in the Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl819

b:11.8
occ:1.00
CL A:TXV819 0.0 11.8 1.0
C23 A:TXV819 1.8 8.8 1.0
C24 A:TXV819 2.7 8.9 1.0
C22 A:TXV819 2.7 8.5 1.0
O2 A:EDO804 3.7 31.7 1.0
O A:HOH1049 3.7 31.7 1.0
C2 A:EDO804 3.8 28.5 1.0
O A:HOH1077 3.9 32.6 1.0
CG2 A:ILE463 3.9 14.3 1.0
N3 A:TXV819 4.0 8.8 1.0
C21 A:TXV819 4.0 7.9 1.0
O A:HOH1029 4.0 36.1 1.0
O2 A:EDO806 4.3 34.9 1.0
CE2 A:PHE583 4.3 9.4 1.0
CH2 A:TRP531 4.4 11.5 1.0
C20 A:TXV819 4.4 8.0 1.0
C1 A:EDO806 4.7 30.6 1.0
CZ3 A:TRP531 4.7 11.3 1.0
O A:HOH1042 4.7 15.3 1.0
CZ A:PHE583 4.9 9.4 1.0
CZ2 A:TRP531 5.0 11.3 1.0
C2 A:EDO806 5.0 32.1 1.0

Chlorine binding site 2 out of 2 in 8c7y

Go back to Chlorine Binding Sites List in 8c7y
Chlorine binding site 2 out of 2 in the Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl803

b:13.6
occ:1.00
CL B:TXV803 0.0 13.6 1.0
C23 B:TXV803 1.7 10.7 1.0
C22 B:TXV803 2.7 9.9 1.0
C24 B:TXV803 2.7 10.4 1.0
O B:HOH1087 3.6 35.5 1.0
O B:HOH912 3.8 41.6 1.0
O B:HOH1092 3.8 47.4 1.0
CG2 B:ILE463 3.8 20.6 1.0
CE2 B:PHE583 3.9 13.7 1.0
N3 B:TXV803 4.0 9.5 1.0
C21 B:TXV803 4.0 8.9 1.0
O B:ALA598 4.0 33.7 1.0
CH2 B:TRP531 4.1 12.8 1.0
C20 B:TXV803 4.4 8.9 1.0
CZ B:PHE583 4.4 14.3 1.0
CZ3 B:TRP531 4.5 12.5 1.0
CB B:ALA598 4.7 29.1 1.0
C B:ALA598 4.7 31.2 1.0
CZ2 B:TRP531 4.7 12.8 1.0
CG2 B:THR599 4.7 29.2 1.0
O B:HOH946 4.8 18.2 1.0
CB B:ILE463 4.9 20.2 1.0

Reference:

A.Chaikuad, P.Bonnet, S.Knapp, Structural Genomics Consortium (Sgc). Crystal Structure of Braf V600E in Complex with A Hybrid Compound 6 To Be Published.
Page generated: Tue Jul 30 07:46:50 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy