Chlorine in PDB 8cbf: Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs

Protein crystallography data

The structure of Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs, PDB code: 8cbf was solved by D.Zhou, J.Ren, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.14 / 2.33
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 177.002, 144.275, 49.665, 90, 90, 90
R / Rfree (%) 21.5 / 25.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs (pdb code 8cbf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs, PDB code: 8cbf:

Chlorine binding site 1 out of 1 in 8cbf

Go back to Chlorine Binding Sites List in 8cbf
Chlorine binding site 1 out of 1 in the Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Delta-Rbd Complexed with Omi-42 and Beta-49 Fabs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:56.4
occ:1.00
O A:HOH419 3.1 46.0 1.0
N A:TRP47 3.3 47.7 1.0
N B:PHE100 3.4 43.0 1.0
CA B:THR99 3.9 50.3 1.0
CA A:GLU46 3.9 49.3 1.0
CB A:TRP47 4.0 43.2 1.0
C A:GLU46 4.1 49.2 1.0
CD1 B:PHE100 4.1 47.4 1.0
C B:THR99 4.1 46.8 1.0
O A:LEU45 4.1 46.7 1.0
CA A:TRP47 4.2 46.2 1.0
CB B:PHE100 4.2 43.3 1.0
CA B:PHE100 4.3 47.0 1.0
O B:PHE100 4.4 45.5 1.0
CB B:THR99 4.4 54.9 1.0
CG A:GLU46 4.4 61.9 1.0
O A:TRP47 4.6 42.3 1.0
CG B:PHE100 4.7 43.5 1.0
CG2 B:THR99 4.7 61.1 1.0
O B:TRP98 4.7 53.4 1.0
CB A:GLU46 4.7 50.6 1.0
O B:HOH446 4.8 51.9 1.0
O B:HOH468 4.8 61.2 1.0
N A:GLU46 4.8 44.7 1.0
C B:PHE100 4.8 45.7 1.0
C A:LEU45 4.9 45.4 1.0
C A:TRP47 4.9 39.3 1.0

Reference:

D.I.Stuart, D.Zhou, J.Ren, D.I.Stuart. N/A N/A.
Page generated: Tue Jul 30 07:48:52 2024

Last articles

Zn in 2YRC
Zn in 2YQP
Zn in 2YR2
Zn in 2YQL
Zn in 2YPT
Zn in 2YPA
Zn in 2YPU
Zn in 2YNW
Zn in 2YNT
Zn in 2YNV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy