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Chlorine in PDB 8cn4: Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid

Enzymatic activity of Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid

All present enzymatic activity of Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid:
2.3.1.179;

Protein crystallography data

The structure of Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid, PDB code: 8cn4 was solved by C.Georgiou, R.Brenk, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 71.98 / 1.67
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.69, 84.24, 138.56, 90, 90, 90
R / Rfree (%) 16.3 / 19.6

Other elements in 8cn4:

The structure of Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid (pdb code 8cn4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid, PDB code: 8cn4:

Chlorine binding site 1 out of 1 in 8cn4

Go back to Chlorine Binding Sites List in 8cn4
Chlorine binding site 1 out of 1 in the Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pa.Fabf-C164Q in Complex with 5-Acetamido-2-Chlorobenzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:50.3
occ:1.00
CL1 B:V5R501 0.0 50.3 1.0
C5 B:V5R501 1.7 50.9 1.0
C6 B:V5R501 2.7 48.0 1.0
C4 B:V5R501 2.8 47.0 1.0
O2 B:V5R501 3.0 45.5 1.0
C9 B:V5R501 3.2 51.3 1.0
O B:HOH650 3.5 27.7 1.0
O B:THR271 3.5 32.5 1.0
CD1 B:PHE400 3.6 26.5 1.0
CE1 B:PHE400 3.8 27.7 1.0
C1 B:V5R501 4.0 45.1 1.0
C B:GLY399 4.0 24.2 1.0
C3 B:V5R501 4.0 42.8 1.0
N B:PHE400 4.1 23.1 1.0
O B:PHE398 4.2 34.4 1.0
CA B:GLY399 4.2 25.6 1.0
O3 B:V5R501 4.3 45.1 1.0
O B:GLY399 4.4 23.1 1.0
NE2 B:GLN164 4.5 28.5 1.0
C2 B:V5R501 4.6 39.3 1.0
C B:PHE398 4.6 29.7 1.0
N B:GLY399 4.6 24.5 1.0
OE1 B:GLN164 4.6 24.4 1.0
CD B:GLN164 4.6 26.6 1.0
C B:THR271 4.7 34.4 1.0
CA B:PHE400 4.7 25.1 1.0
CG B:PHE400 4.8 24.6 1.0
O B:HOH788 5.0 29.9 1.0

Reference:

C.Georgiou, L.O.Espeland, H.Bukya, V.Yadrykhinsky, B.E.Haug, P.Mainkar, R.Brenk. New Starting Points For Antibiotics Targeting P. Aeruginosa Fabf Discovered By Crystallographic Fragment Screening Followed By Hit Expansion Chemrxiv 2023.
ISSN: ISSN 2573-2293
DOI: 10.26434/CHEMRXIV-2023-CWK25
Page generated: Tue Jul 30 08:04:27 2024

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