Chlorine in PDB 8d3h: Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine
Protein crystallography data
The structure of Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine, PDB code: 8d3h
was solved by
C.A.Brosey,
J.A.Tainer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.36 /
2.51
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
90.787,
114.767,
120.907,
90,
90,
90
|
R / Rfree (%)
|
20.4 /
23.1
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine
(pdb code 8d3h). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine, PDB code: 8d3h:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 8d3h
Go back to
Chlorine Binding Sites List in 8d3h
Chlorine binding site 1 out
of 2 in the Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl702
b:60.5
occ:0.88
|
CL09
|
A:QBC702
|
0.0
|
60.5
|
0.9
|
C08
|
A:QBC702
|
1.8
|
52.5
|
0.9
|
C07
|
A:QBC702
|
2.7
|
48.1
|
0.9
|
C10
|
A:QBC702
|
2.7
|
51.2
|
0.9
|
H071
|
A:QBC702
|
2.8
|
57.9
|
0.9
|
H101
|
A:QBC702
|
2.8
|
61.6
|
0.9
|
HB2
|
A:LEU311
|
3.1
|
63.9
|
1.0
|
HD22
|
A:LEU311
|
3.1
|
67.8
|
1.0
|
C9
|
A:FAD701
|
3.5
|
54.1
|
1.0
|
H9
|
A:FAD701
|
3.5
|
65.0
|
1.0
|
O
|
A:HOH848
|
3.6
|
57.2
|
1.0
|
C8
|
A:FAD701
|
3.7
|
51.4
|
1.0
|
HD13
|
A:LEU311
|
3.7
|
64.7
|
1.0
|
HM82
|
A:FAD701
|
3.8
|
64.3
|
1.0
|
O
|
A:HOH806
|
3.9
|
54.4
|
1.0
|
CB
|
A:LEU311
|
4.0
|
53.1
|
1.0
|
C8M
|
A:FAD701
|
4.0
|
53.5
|
1.0
|
CD2
|
A:LEU311
|
4.0
|
56.4
|
1.0
|
C06
|
A:QBC702
|
4.0
|
50.7
|
0.9
|
HM81
|
A:FAD701
|
4.0
|
64.3
|
1.0
|
C11
|
A:QBC702
|
4.0
|
53.2
|
0.9
|
C9A
|
A:FAD701
|
4.1
|
53.5
|
1.0
|
H1'2
|
A:FAD701
|
4.1
|
71.9
|
1.0
|
HH22
|
A:ARG285
|
4.1
|
69.8
|
1.0
|
HB3
|
A:LEU311
|
4.3
|
63.9
|
1.0
|
HH21
|
A:ARG285
|
4.3
|
69.8
|
1.0
|
C7
|
A:FAD701
|
4.3
|
50.5
|
1.0
|
CG
|
A:LEU311
|
4.4
|
55.8
|
1.0
|
HD23
|
A:LEU311
|
4.4
|
67.8
|
1.0
|
O
|
A:HOH875
|
4.5
|
52.1
|
1.0
|
CD1
|
A:LEU311
|
4.5
|
53.8
|
1.0
|
C12
|
A:QBC702
|
4.5
|
54.6
|
0.9
|
NH2
|
A:ARG285
|
4.5
|
58.1
|
1.0
|
HD21
|
A:LEU311
|
4.6
|
67.8
|
1.0
|
C5X
|
A:FAD701
|
4.7
|
52.4
|
1.0
|
N10
|
A:FAD701
|
4.7
|
54.3
|
1.0
|
H
|
A:LEU311
|
4.7
|
62.2
|
1.0
|
C6
|
A:FAD701
|
4.7
|
51.6
|
1.0
|
O
|
A:HOH873
|
4.8
|
46.1
|
1.0
|
H111
|
A:QBC702
|
4.8
|
64.0
|
0.9
|
C1'
|
A:FAD701
|
4.8
|
59.8
|
1.0
|
O
|
A:HOH877
|
4.8
|
53.4
|
1.0
|
HM83
|
A:FAD701
|
4.9
|
64.3
|
1.0
|
HD11
|
A:LEU311
|
5.0
|
64.7
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 8d3h
Go back to
Chlorine Binding Sites List in 8d3h
Chlorine binding site 2 out
of 2 in the Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Human Apoptosis-Inducing Factor (Aif) W196A Mutant Complexed with 7-Chloroquinolin-4-Amine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl702
b:60.3
occ:0.77
|
CL09
|
B:QBC702
|
0.0
|
60.3
|
0.8
|
C08
|
B:QBC702
|
1.8
|
49.6
|
0.8
|
C07
|
B:QBC702
|
2.7
|
48.2
|
0.8
|
C10
|
B:QBC702
|
2.7
|
48.9
|
0.8
|
H071
|
B:QBC702
|
2.8
|
58.0
|
0.8
|
H101
|
B:QBC702
|
2.8
|
58.8
|
0.8
|
HD22
|
B:LEU311
|
2.9
|
67.5
|
1.0
|
HB2
|
B:LEU311
|
3.0
|
62.3
|
1.0
|
C9
|
B:FAD701
|
3.6
|
50.0
|
1.0
|
H9
|
B:FAD701
|
3.6
|
60.2
|
1.0
|
CD2
|
B:LEU311
|
3.8
|
56.1
|
1.0
|
C8
|
B:FAD701
|
3.8
|
52.5
|
1.0
|
CB
|
B:LEU311
|
3.9
|
51.9
|
1.0
|
HD13
|
B:LEU311
|
3.9
|
62.1
|
1.0
|
HM83
|
B:FAD701
|
4.0
|
71.0
|
1.0
|
C06
|
B:QBC702
|
4.0
|
48.0
|
0.8
|
H1'1
|
B:FAD701
|
4.0
|
66.9
|
1.0
|
HD23
|
B:LEU311
|
4.0
|
67.5
|
1.0
|
C11
|
B:QBC702
|
4.0
|
49.3
|
0.8
|
C9A
|
B:FAD701
|
4.1
|
49.8
|
1.0
|
C8M
|
B:FAD701
|
4.1
|
59.1
|
1.0
|
HM81
|
B:FAD701
|
4.2
|
71.0
|
1.0
|
HH22
|
B:ARG285
|
4.2
|
66.5
|
1.0
|
HB3
|
B:LEU311
|
4.2
|
62.3
|
1.0
|
O
|
B:HOH865
|
4.2
|
55.3
|
1.0
|
CG
|
B:LEU311
|
4.3
|
53.9
|
1.0
|
HH21
|
B:ARG285
|
4.4
|
66.5
|
1.0
|
C7
|
B:FAD701
|
4.5
|
51.9
|
1.0
|
HD21
|
B:LEU311
|
4.5
|
67.5
|
1.0
|
C12
|
B:QBC702
|
4.5
|
48.6
|
0.8
|
O
|
B:HOH882
|
4.5
|
44.2
|
1.0
|
O
|
B:HOH871
|
4.6
|
51.9
|
1.0
|
CD1
|
B:LEU311
|
4.6
|
51.7
|
1.0
|
NH2
|
B:ARG285
|
4.6
|
55.3
|
1.0
|
N10
|
B:FAD701
|
4.6
|
51.9
|
1.0
|
C5X
|
B:FAD701
|
4.7
|
50.4
|
1.0
|
C1'
|
B:FAD701
|
4.7
|
55.6
|
1.0
|
H111
|
B:QBC702
|
4.8
|
59.3
|
0.8
|
C6
|
B:FAD701
|
4.8
|
48.8
|
1.0
|
H
|
B:LEU311
|
4.8
|
62.8
|
1.0
|
H1'2
|
B:FAD701
|
5.0
|
66.9
|
1.0
|
|
Reference:
C.A.Brosey,
T.Link,
R.Shen,
D.Moiani,
K.Burnett,
G.Hura,
D.E.Jones,
J.A.Tainer.
Integrating Early Structural Selection Into Chemical Library Screening For Drug Discovery with High-Throughput Small-Angle X-Ray Scattering (Saxs) To Be Published.
Page generated: Tue Jul 30 08:24:48 2024
|