Chlorine in PDB 8dtq: Crystal Structure of Staphylococcus Aureus PSK41 Cop

Protein crystallography data

The structure of Crystal Structure of Staphylococcus Aureus PSK41 Cop, PDB code: 8dtq was solved by W.G.Walton, T.C.Eakes, M.R.Redinbo, K.J.Mclaughlin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.58 / 1.45
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.46, 56.261, 46.018, 90, 104.34, 90
R / Rfree (%) 18.8 / 22.3

Other elements in 8dtq:

The structure of Crystal Structure of Staphylococcus Aureus PSK41 Cop also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Staphylococcus Aureus PSK41 Cop (pdb code 8dtq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Staphylococcus Aureus PSK41 Cop, PDB code: 8dtq:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 8dtq

Go back to Chlorine Binding Sites List in 8dtq
Chlorine binding site 1 out of 3 in the Crystal Structure of Staphylococcus Aureus PSK41 Cop


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Staphylococcus Aureus PSK41 Cop within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl101

b:66.0
occ:1.00
NZ A:LYS49 3.2 35.3 1.0
CE A:LYS49 4.5 34.2 1.0

Chlorine binding site 2 out of 3 in 8dtq

Go back to Chlorine Binding Sites List in 8dtq
Chlorine binding site 2 out of 3 in the Crystal Structure of Staphylococcus Aureus PSK41 Cop


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Staphylococcus Aureus PSK41 Cop within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl102

b:64.8
occ:1.00
N A:GLN28 3.0 43.4 1.0
CA A:ARG27 3.4 44.8 1.0
NH1 A:ARG21 3.4 35.5 1.0
CB A:ARG27 3.6 45.2 1.0
C A:ARG27 3.7 43.8 1.0
CB A:GLN28 4.0 44.7 1.0
CA A:GLN28 4.1 43.9 1.0
CG A:GLN28 4.1 45.1 1.0
CZ A:ARG21 4.3 35.0 1.0
NH2 A:ARG21 4.5 35.2 1.0
O A:LYS26 4.7 44.8 1.0
N A:ARG27 4.7 45.2 1.0
CD A:GLN28 4.9 46.0 1.0
OE1 A:GLN28 4.9 47.2 1.0
O A:ARG27 5.0 44.0 1.0

Chlorine binding site 3 out of 3 in 8dtq

Go back to Chlorine Binding Sites List in 8dtq
Chlorine binding site 3 out of 3 in the Crystal Structure of Staphylococcus Aureus PSK41 Cop


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Staphylococcus Aureus PSK41 Cop within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl103

b:52.7
occ:1.00
N A:ARG52 3.0 28.6 1.0
CD A:PRO51 3.4 35.2 1.0
N A:PRO51 3.4 33.6 1.0
C A:LYS50 3.5 32.6 1.0
CB A:LYS50 3.6 36.4 1.0
CA A:ARG52 3.7 28.8 1.0
CB A:ARG52 3.7 32.1 1.0
CA A:LYS50 3.8 32.0 1.0
C A:ARG52 3.9 26.2 1.0
C A:PRO51 4.0 30.4 1.0
N A:ILE53 4.1 24.3 1.0
O A:LYS50 4.1 32.5 1.0
CG A:PRO51 4.1 35.4 1.0
CA A:PRO51 4.2 33.0 1.0
O A:ARG52 4.5 27.9 1.0
CE A:LYS50 4.5 44.3 1.0
CG A:LYS50 4.6 40.4 1.0
CG A:ARG52 4.6 34.8 1.0
CG1 A:ILE53 4.7 27.1 1.0
NZ A:LYS50 4.8 45.4 1.0
CB A:PRO51 4.9 34.2 1.0
CA A:ILE53 5.0 24.1 1.0

Reference:

A.Sarosh, K.J.Mclaughlin, N.Firth. Conjugative PSK41-Family Plasmids of Staphylococcus Aureus Encode A Cryptic Repressor of Replication To Be Published.
Page generated: Tue Jul 30 08:52:32 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy