Chlorine in PDB 8efl: SR17018-Bound Mu-Opioid Receptor-Gi Complex

Chlorine Binding Sites:

The binding sites of Chlorine atom in the SR17018-Bound Mu-Opioid Receptor-Gi Complex (pdb code 8efl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the SR17018-Bound Mu-Opioid Receptor-Gi Complex, PDB code: 8efl:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 8efl

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Chlorine binding site 1 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Cl401

b:35.5
occ:1.00
CL1 R:WH9401 0.0 35.5 1.0
C19 R:WH9401 1.7 35.5 1.0
C17 R:WH9401 2.7 35.5 1.0
C16 R:WH9401 2.7 35.5 1.0
CD2 R:HIS299 3.7 11.6 1.0
CG2 R:VAL302 3.8 7.5 1.0
CG1 R:ILE298 3.9 12.1 1.0
NE2 R:HIS299 3.9 11.6 1.0
O R:ILE298 4.0 12.1 1.0
C14 R:WH9401 4.0 35.5 1.0
C15 R:WH9401 4.0 35.5 1.0
CG R:HIS299 4.0 11.6 1.0
CA R:HIS299 4.0 11.6 1.0
C R:ILE298 4.1 12.1 1.0
N R:HIS299 4.2 11.6 1.0
CE1 R:HIS299 4.3 11.6 1.0
CB R:VAL302 4.3 7.5 1.0
ND1 R:HIS299 4.3 11.6 1.0
CG2 R:ILE298 4.5 12.1 1.0
C18 R:WH9401 4.5 35.5 1.0
CB R:ILE298 4.6 12.1 1.0
CB R:HIS299 4.6 11.6 1.0
CG1 R:VAL302 4.7 7.5 1.0
CD1 R:ILE298 4.9 12.1 1.0
CA R:ILE298 5.0 12.1 1.0

Chlorine binding site 2 out of 6 in 8efl

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Chlorine binding site 2 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Cl401

b:35.5
occ:1.00
CL2 R:WH9401 0.0 35.5 1.0
C04 R:WH9401 1.7 35.5 1.0
C02 R:WH9401 2.7 35.5 1.0
C06 R:WH9401 2.7 35.5 1.0
CL3 R:WH9401 3.1 35.5 1.0
CG1 R:VAL145 3.5 16.9 1.0
CG R:GLN126 3.5 22.3 1.0
NE2 R:GLN126 3.8 22.3 1.0
C01 R:WH9401 4.0 35.5 1.0
C05 R:WH9401 4.0 35.5 1.0
CD R:GLN126 4.2 22.3 1.0
CG1 R:ILE146 4.4 16.5 1.0
O R:THR122 4.4 12.7 1.0
C03 R:WH9401 4.5 35.5 1.0
CB R:VAL145 4.5 16.9 1.0
OD2 R:ASP149 4.7 15.1 1.0
CB R:GLN126 4.7 22.3 1.0
N R:GLN126 4.8 22.3 1.0
C R:VAL145 4.8 16.9 1.0
N R:ILE146 4.8 16.5 1.0
CA R:GLN126 4.9 22.3 1.0
O R:VAL145 4.9 16.9 1.0
CA R:ILE146 5.0 16.5 1.0

Chlorine binding site 3 out of 6 in 8efl

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Chlorine binding site 3 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Cl401

b:35.5
occ:1.00
CL3 R:WH9401 0.0 35.5 1.0
C02 R:WH9401 1.7 35.5 1.0
C04 R:WH9401 2.7 35.5 1.0
C01 R:WH9401 2.7 35.5 1.0
CL2 R:WH9401 3.1 35.5 1.0
ND2 R:ASN129 3.1 26.2 1.0
CZ3 R:TRP135 3.5 28.9 1.0
SG R:CYS219 3.6 30.3 1.0
CB R:CYS219 3.8 30.3 1.0
CE3 R:TRP135 3.9 28.9 1.0
CH2 R:TRP135 3.9 28.9 1.0
C03 R:WH9401 4.0 35.5 1.0
C06 R:WH9401 4.0 35.5 1.0
CG R:ASN129 4.2 26.2 1.0
O R:CYS219 4.3 30.3 1.0
CB R:ASN129 4.4 26.2 1.0
C05 R:WH9401 4.5 35.5 1.0
CD2 R:TRP135 4.7 28.9 1.0
CZ2 R:TRP135 4.7 28.9 1.0
CG R:GLN126 4.8 22.3 1.0
CA R:GLN126 4.9 22.3 1.0
O R:PHE125 5.0 22.2 1.0

Chlorine binding site 4 out of 6 in 8efl

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Chlorine binding site 4 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Cl401

b:39.8
occ:1.00
CL1 M:WH9401 0.0 39.8 1.0
C19 M:WH9401 1.7 39.8 1.0
C17 M:WH9401 2.7 39.8 1.0
C16 M:WH9401 2.7 39.8 1.0
CD2 M:HIS299 3.6 11.4 1.0
NE2 M:HIS299 3.8 11.4 1.0
C14 M:WH9401 4.0 39.8 1.0
C15 M:WH9401 4.0 39.8 1.0
CG2 M:VAL302 4.1 11.7 1.0
CG M:HIS299 4.1 11.4 1.0
CB M:VAL302 4.3 11.7 1.0
CA M:HIS299 4.3 11.4 1.0
CE1 M:HIS299 4.4 11.4 1.0
CG1 M:VAL302 4.5 11.7 1.0
O M:ILE298 4.5 12.4 1.0
C18 M:WH9401 4.5 39.8 1.0
ND1 M:HIS299 4.5 11.4 1.0
CG1 M:ILE298 4.6 12.4 1.0
N M:HIS299 4.7 11.4 1.0
CG1 M:VAL238 4.7 25.6 1.0
C M:ILE298 4.7 12.4 1.0
CB M:HIS299 4.8 11.4 1.0

Chlorine binding site 5 out of 6 in 8efl

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Chlorine binding site 5 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Cl401

b:39.8
occ:1.00
CL2 M:WH9401 0.0 39.8 1.0
C04 M:WH9401 1.7 39.8 1.0
C02 M:WH9401 2.7 39.8 1.0
C06 M:WH9401 2.7 39.8 1.0
CL3 M:WH9401 3.1 39.8 1.0
CG M:GLN126 3.5 27.3 1.0
CG1 M:VAL145 3.5 20.0 1.0
C01 M:WH9401 4.0 39.8 1.0
NE2 M:GLN126 4.0 27.3 1.0
C05 M:WH9401 4.0 39.8 1.0
O M:THR122 4.1 19.9 1.0
CD M:GLN126 4.3 27.3 1.0
N M:GLN126 4.4 27.3 1.0
C03 M:WH9401 4.5 39.8 1.0
CB M:PHE125 4.5 27.9 1.0
CB M:GLN126 4.7 27.3 1.0
OD2 M:ASP149 4.7 16.9 1.0
CA M:GLN126 4.7 27.3 1.0
CB M:VAL145 4.8 20.0 1.0
CB M:THR122 4.8 19.9 1.0
C M:PHE125 4.9 27.9 1.0

Chlorine binding site 6 out of 6 in 8efl

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Chlorine binding site 6 out of 6 in the SR17018-Bound Mu-Opioid Receptor-Gi Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of SR17018-Bound Mu-Opioid Receptor-Gi Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Cl401

b:39.8
occ:1.00
CL3 M:WH9401 0.0 39.8 1.0
C02 M:WH9401 1.7 39.8 1.0
C01 M:WH9401 2.7 39.8 1.0
C04 M:WH9401 2.7 39.8 1.0
CL2 M:WH9401 3.1 39.8 1.0
ND2 M:ASN129 3.4 33.3 1.0
CZ3 M:TRP135 3.4 36.4 1.0
CE3 M:TRP135 3.7 36.4 1.0
SG M:CYS219 3.8 37.2 1.0
C03 M:WH9401 4.0 39.8 1.0
C06 M:WH9401 4.0 39.8 1.0
CB M:CYS219 4.0 37.2 1.0
CH2 M:TRP135 4.1 36.4 1.0
CG M:ASN129 4.3 33.3 1.0
CB M:ASN129 4.4 33.3 1.0
C05 M:WH9401 4.5 39.8 1.0
O M:CYS219 4.5 37.2 1.0
CD2 M:TRP135 4.7 36.4 1.0
O M:PHE125 4.7 27.9 1.0
C M:PHE125 5.0 27.9 1.0
CZ2 M:TRP135 5.0 36.4 1.0

Reference:

Y.Zhuang, Y.Wang, B.He, X.He, X.E.Zhou, S.Guo, Q.Rao, J.Yang, J.Liu, Q.Zhou, X.Wang, M.Liu, W.Liu, X.Jiang, D.Yang, H.Jiang, J.Shen, K.Melcher, H.Chen, Y.Jiang, X.Cheng, M.W.Wang, X.Xie, H.E.Xu. Molecular Recognition of Morphine and Fentanyl By the Human Mu-Opioid Receptor. Cell V. 185 4361 2022.
ISSN: ISSN 1097-4172
PubMed: 36368306
DOI: 10.1016/J.CELL.2022.09.041
Page generated: Tue Jul 30 09:01:07 2024

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