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Chlorine in PDB 8ekx: Structure of Mbp-Mcl-1 in Complex with MIK665

Protein crystallography data

The structure of Structure of Mbp-Mcl-1 in Complex with MIK665, PDB code: 8ekx was solved by R.A.Judge, A.S.Judd, A.J.Souers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.44 / 1.55
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 97.362, 136.889, 38.609, 90, 90, 90
R / Rfree (%) 18.6 / 21.4

Other elements in 8ekx:

The structure of Structure of Mbp-Mcl-1 in Complex with MIK665 also contains other interesting chemical elements:

Fluorine (F) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Mbp-Mcl-1 in Complex with MIK665 (pdb code 8ekx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Mbp-Mcl-1 in Complex with MIK665, PDB code: 8ekx:

Chlorine binding site 1 out of 1 in 8ekx

Go back to Chlorine Binding Sites List in 8ekx
Chlorine binding site 1 out of 1 in the Structure of Mbp-Mcl-1 in Complex with MIK665


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Mbp-Mcl-1 in Complex with MIK665 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl4000

b:24.2
occ:1.00
CL1 A:OK54000 0.0 24.2 1.0
C23 A:OK54000 1.7 24.4 1.0
C21 A:OK54000 2.7 24.1 1.0
C24 A:OK54000 2.7 24.8 1.0
O4 A:OK54000 2.8 25.6 1.0
C22 A:OK54000 3.0 23.9 1.0
O A:ALA227 3.3 22.4 1.0
CB A:MET231 3.4 26.9 1.0
C A:ALA227 3.7 22.1 1.0
C43 A:OK54000 3.8 24.7 1.0
CG A:MET231 3.9 28.7 1.0
CD1 A:PHE228 3.9 22.3 1.0
C20 A:OK54000 4.0 24.4 1.0
C32 A:OK54000 4.0 24.7 1.0
CE A:MET231 4.0 30.5 1.0
C31 A:OK54000 4.1 30.0 1.0
N A:PHE228 4.1 21.7 1.0
CB A:ALA227 4.1 21.8 1.0
CA A:PHE228 4.2 21.8 1.0
C25 A:OK54000 4.3 26.9 1.0
CE1 A:PHE228 4.4 23.1 1.0
C42 A:OK54000 4.4 24.7 1.0
C33 A:OK54000 4.5 24.4 1.0
CA A:ALA227 4.5 21.5 1.0
C44 A:OK54000 4.6 24.6 1.0
CE1 A:PHE270 4.7 23.3 1.0
CD1 A:PHE270 4.8 22.5 1.0
CA A:MET231 4.8 27.0 1.0
C26 A:OK54000 4.8 28.4 1.0
SD A:MET231 4.8 30.8 1.0
CG A:PHE228 4.9 21.5 1.0
C30 A:OK54000 5.0 31.0 1.0
N2 A:OK54000 5.0 29.8 1.0
N A:MET231 5.0 26.9 1.0

Reference:

J.Yuda, C.Will, D.C.Phillips, L.Abraham, C.Alvey, A.Avigdor, W.Buck, L.Besenhofer, E.Boghaert, D.Cheng, D.Cojocari, K.Doyle, T.M.Hansen, K.Huang, E.F.Johnson, A.S.Judd, R.A.Judge, J.C.Kalvass, A.Kunzer, L.T.Lam, R.Li, R.L.Martin, A.Mastracchio, M.Mitten, A.Petrich, J.Wang, J.E.Ward, H.Zhang, X.Wang, J.E.Wolff, K.M.Bell-Mcguinn, A.J.Souers. Selective Mcl-1 Inhibitor Abbv-467 Is Efficacious in Tumor Models But Is Associated with Cardiac Troponin Increases in Patients. Commun Med (Lond) V. 3 154 2023.
ISSN: ISSN 2730-664X
PubMed: 37880389
DOI: 10.1038/S43856-023-00380-Z
Page generated: Tue Jul 30 09:01:08 2024

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