Chlorine in PDB 8en9: Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment

The structure of Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment, PDB code: 8en9 was solved by A.Karasawa, B.Andi, M.R.Ruchs, W.Shi, S.Mcsweeney, W.A.Hendrickson, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.53 / 2.60
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	95.399, 95.399, 136.128, 90, 90, 120
R / Rfree (%)	17 / 21.7

The structure of Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment (pdb code 8en9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment, PDB code: 8en9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl406 b:39.9 occ:0.69 N A:GLY282 3.1 25.0 1.0 N A:VAL283 3.2 24.9 1.0 C A:LEU280 3.4 21.0 1.0 CA A:LEU280 3.4 19.2 1.0 CA A:GLY282 3.5 24.2 1.0 N A:GLN281 3.7 24.6 1.0 O A:LEU280 3.8 29.2 1.0 C A:GLY282 3.8 28.5 1.0 CG2 A:VAL283 3.9 22.8 1.0 CB A:LEU280 3.9 27.5 1.0 O A:HOH549 4.0 39.1 1.0 CD2 A:LEU280 4.1 19.6 1.0 C A:GLN281 4.2 26.9 1.0 CB A:VAL283 4.2 29.6 1.0 CA A:VAL283 4.3 31.2 1.0 O A:HOH558 4.4 56.2 1.0 CA A:GLN281 4.6 29.9 1.0 CG A:LEU280 4.7 29.1 1.0 N A:LEU280 4.7 18.3 1.0

Chlorine binding site 2 out of 2 in the Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl407 b:65.2 occ:0.89 CB A:ASN254 3.3 49.5 1.0 N A:ILE255 3.3 44.5 1.0 CA A:ASN254 3.4 45.4 1.0 NZ A:LYS305 3.7 76.2 1.0 C A:ASN254 3.9 44.8 1.0 CE A:LYS305 3.9 65.4 1.0 CD A:LYS305 4.0 62.2 1.0 CB A:ILE255 4.3 43.8 1.0 CA A:ILE255 4.4 40.8 1.0 O A:LEU253 4.5 60.4 1.0 CG2 A:ILE255 4.6 43.4 1.0 CG A:ASN254 4.7 56.5 1.0 N A:ASN254 4.7 50.0 1.0

A.Karasawa, B.Andi, M.R.Fuchs, W.Shi, S.Mcsweeney, W.A.Hendrickson, Q.Liu. Multi-Crystal Native-Sad Phasing at 5 Kev with A Helium Environment Iucrj V. 9 768 2022.
ISSN: ESSN 2052-2525
DOI: 10.1107/S205225252200971X