Chlorine in PDB 8ewo: Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa

Protein crystallography data

The structure of Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa, PDB code: 8ewo was solved by P.J.Stogios, T.Skarina, M.Endres, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.71 / 2.47
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.723, 76.608, 75.43, 90, 94.63, 90
R / Rfree (%) 17.9 / 21.9

Other elements in 8ewo:

The structure of Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa also contains other interesting chemical elements:

Zinc (Zn) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa (pdb code 8ewo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa, PDB code: 8ewo:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 8ewo

Go back to Chlorine Binding Sites List in 8ewo
Chlorine binding site 1 out of 3 in the Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:43.2
occ:1.00
NZ A:LYS255 2.7 35.7 1.0
NH2 A:ARG252 3.1 37.2 1.0
NH1 A:ARG252 3.6 31.3 1.0
CZ A:ARG252 3.8 33.5 1.0
CE A:LYS255 3.8 37.7 1.0
CG A:ARG141 3.8 33.3 1.0
O A:CYS139 3.9 32.3 1.0
O A:HOH449 4.1 40.0 1.0
CD A:ARG141 4.3 30.3 1.0
CD A:LYS255 4.3 37.5 1.0
O A:HOH471 4.8 26.8 1.0
OD1 A:ASN176 4.8 31.6 1.0
N A:ARG141 4.8 27.5 1.0

Chlorine binding site 2 out of 3 in 8ewo

Go back to Chlorine Binding Sites List in 8ewo
Chlorine binding site 2 out of 3 in the Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:47.3
occ:1.00
NZ B:LYS255 3.2 33.5 1.0
O B:HOH421 3.3 30.2 1.0
NH2 B:ARG252 3.4 32.6 1.0
NH1 B:ARG252 3.5 29.4 1.0
CE B:LYS255 3.7 33.4 1.0
O B:CYS139 3.8 28.7 1.0
CZ B:ARG252 3.9 31.9 1.0
CG B:ARG141 4.0 33.4 1.0
CD B:LYS255 4.1 33.9 1.0
O B:HOH411 4.2 28.0 1.0
CD B:ARG141 4.3 28.8 1.0
O B:HOH470 4.5 20.0 1.0
O B:HOH538 4.7 24.9 1.0
N B:ARG141 4.7 28.0 1.0
OD1 B:ASN176 4.8 27.9 1.0
C B:CYS139 4.9 28.6 1.0
CD2 B:TYR172 5.0 29.3 1.0
NH1 B:ARG141 5.0 45.1 1.0

Chlorine binding site 3 out of 3 in 8ewo

Go back to Chlorine Binding Sites List in 8ewo
Chlorine binding site 3 out of 3 in the Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:41.1
occ:1.00
NZ C:LYS255 3.0 38.6 1.0
NH2 C:ARG252 3.2 33.5 1.0
NH1 C:ARG252 3.3 31.4 1.0
O C:HOH408 3.5 28.6 1.0
CG C:ARG141 3.7 35.8 1.0
CZ C:ARG252 3.7 35.2 1.0
CE C:LYS255 3.9 32.4 1.0
O C:CYS139 3.9 25.2 1.0
CD C:LYS255 4.0 36.3 1.0
CD C:ARG141 4.3 36.7 1.0
O C:HOH415 4.4 31.3 1.0
NH1 C:ARG141 4.6 46.8 1.0
N C:ARG141 4.7 31.5 1.0
O C:HOH451 4.8 20.7 1.0
OD1 C:ASN176 5.0 31.6 1.0
CB C:ARG141 5.0 31.3 1.0

Reference:

P.J.Stogios, P.J.Stogios, T.Skarina, M.Endres, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Tue Jul 30 09:05:05 2024

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