Chlorine in PDB 8ey0: Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid

Enzymatic activity of Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid

All present enzymatic activity of Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid:
3.1.3.16;

Protein crystallography data

The structure of Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid, PDB code: 8ey0 was solved by S.-Y.Park, B.F.Volkman, S.R.Cutler, F.C.Peterson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.13 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.405, 92.214, 96.768, 90, 90, 90
R / Rfree (%) 17.2 / 23.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid (pdb code 8ey0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid, PDB code: 8ey0:

Chlorine binding site 1 out of 1 in 8ey0

Go back to Chlorine Binding Sites List in 8ey0
Chlorine binding site 1 out of 1 in the Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of An Orthogonal PYR1*:HAB1* Chemical-Induced Dimerization Module in Complex with Mandipropamid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:64.6
occ:1.00
 CL1 A:3UZ203 0.0 64.6 1.0
CAA A:3UZ203 1.7 55.2 1.0
CAF A:3UZ203 2.6 55.8 1.0
CAB A:3UZ203 2.7 53.0 1.0
CD1 A:LEU117 3.8 41.5 1.0
CG2 A:VAL163 3.8 46.0 1.0
CG2 A:VAL160 3.8 42.0 1.0
CB A:VAL163 3.9 48.2 1.0
CAE A:3UZ203 3.9 58.7 1.0
CAC A:3UZ203 3.9 57.7 1.0
CG1 A:VAL163 4.0 37.3 1.0
CG1 A:VAL160 4.2 46.2 1.0
CA A:VAL160 4.2 53.7 1.0
CB A:VAL160 4.3 48.1 1.0
CBA A:3UZ203 4.4 49.5 1.0
CAD A:3UZ203 4.4 61.5 1.0
CBB A:3UZ203 4.6 45.5 1.0
OAZ A:3UZ203 4.6 52.5 1.0
CD2 A:LEU117 4.7 40.9 1.0
CG A:LEU117 4.8 40.8 1.0
O A:VAL159 4.9 49.8 1.0
O A:VAL160 4.9 59.4 1.0

Reference:

S.Y.Park, J.Qiu, S.Wei, F.C.Peterson, J.Beltran, A.V.Medina-Cucurella, A.S.Vaidya, Z.Xing, B.F.Volkman, D.A.Nusinow, T.A.Whitehead, I.Wheeldon, S.R.Cutler. An Orthogonalized PYR1-Based Cid Module with Reprogrammable Ligand-Binding Specificity. Nat.Chem.Biol. 2023.
ISSN: ESSN 1552-4469
PubMed: 37872402
DOI: 10.1038/S41589-023-01447-7
Page generated: Tue Jul 30 09:05:09 2024

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