Atomistry » Chlorine » PDB 8f0z-8f97 » 8f97
Atomistry »
  Chlorine »
    PDB 8f0z-8f97 »
      8f97 »

Chlorine in PDB 8f97: Compound 5 Bound to Procaspase-6

Enzymatic activity of Compound 5 Bound to Procaspase-6

All present enzymatic activity of Compound 5 Bound to Procaspase-6:
3.4.22.59;

Protein crystallography data

The structure of Compound 5 Bound to Procaspase-6, PDB code: 8f97 was solved by P.Fan, Y.Zhao, A.R.Renslo, M.R.Arkin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.96 / 2.32
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 102.66, 102.66, 322.767, 90, 90, 120
R / Rfree (%) 17.9 / 21

Other elements in 8f97:

The structure of Compound 5 Bound to Procaspase-6 also contains other interesting chemical elements:

Fluorine (F) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Compound 5 Bound to Procaspase-6 (pdb code 8f97). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Compound 5 Bound to Procaspase-6, PDB code: 8f97:

Chlorine binding site 1 out of 1 in 8f97

Go back to Chlorine Binding Sites List in 8f97
Chlorine binding site 1 out of 1 in the Compound 5 Bound to Procaspase-6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Compound 5 Bound to Procaspase-6 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl302

b:86.9
occ:1.00
O D:HOH437 3.3 66.8 1.0
N D:LYS291 3.4 67.0 1.0
CA D:PRO290 3.8 68.4 1.0
O D:LEU81 3.8 61.5 1.0
C D:LEU81 3.9 58.5 1.0
CG D:LYS291 4.1 75.2 1.0
C D:PRO290 4.1 69.0 1.0
CB D:LYS291 4.1 70.6 1.0
NH2 D:ARG44 4.1 63.9 1.0
N D:GLY82 4.2 60.0 1.0
CA D:GLY82 4.2 60.9 1.0
CA D:LYS291 4.3 74.7 1.0
O D:ASP80 4.4 60.4 1.0
CB D:PRO290 4.5 69.3 1.0
CA D:LEU81 4.5 58.0 1.0
O D:LYS291 4.6 69.4 1.0
O D:PHE289 4.6 59.2 1.0
N D:PRO290 4.8 65.3 1.0
CD D:LYS291 4.8 69.6 1.0
CZ D:ARG44 5.0 56.8 1.0

Reference:

P.Fan, Y.Zhao, A.R.Renslo, M.R.Arkin. A Comprehensive Empirical-Computational Study of Diverse Heteroarene Stacking Interactions Under Physiological Conditions To Be Published.
Page generated: Thu Dec 28 03:12:26 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy