Chlorine in PDB 8fp3: Pkceta Kinase Domain in Complex with Compound 11

Enzymatic activity of Pkceta Kinase Domain in Complex with Compound 11

All present enzymatic activity of Pkceta Kinase Domain in Complex with Compound 11:
2.7.11.13;

Protein crystallography data

The structure of Pkceta Kinase Domain in Complex with Compound 11, PDB code: 8fp3 was solved by E.Johnson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.00 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.239, 77.736, 95.542, 90, 90, 90
R / Rfree (%) 19.8 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pkceta Kinase Domain in Complex with Compound 11 (pdb code 8fp3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pkceta Kinase Domain in Complex with Compound 11, PDB code: 8fp3:

Chlorine binding site 1 out of 1 in 8fp3

Go back to Chlorine Binding Sites List in 8fp3
Chlorine binding site 1 out of 1 in the Pkceta Kinase Domain in Complex with Compound 11


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pkceta Kinase Domain in Complex with Compound 11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl9000

b:38.0
occ:1.00
CL1 A:Y3I9000 0.0 38.0 1.0
C10 A:Y3I9000 1.8 28.1 1.0
O A:HOH9151 2.9 29.0 1.0
N2 A:Y3I9000 2.9 25.4 1.0
C9 A:Y3I9000 2.9 27.6 1.0
C7 A:Y3I9000 3.4 28.4 1.0
C8 A:Y3I9000 3.4 29.4 1.0
SD A:MET433 3.6 47.4 1.0
CE A:MET433 3.6 45.0 1.0
CG2 A:THR417 3.7 29.4 1.0
CB A:THR417 3.7 35.2 1.0
OG1 A:THR417 3.8 36.0 1.0
CB A:MET433 3.8 32.5 1.0
C12 A:Y3I9000 4.1 25.5 1.0
C13 A:Y3I9000 4.2 27.5 1.0
CG A:MET433 4.2 39.0 1.0
CB A:ALA496 4.2 29.3 1.0
O A:GLU434 4.3 21.4 1.0
C6 A:Y3I9000 4.6 27.2 1.0
C3 A:Y3I9000 4.6 27.8 1.0
CA A:ALA496 4.9 28.1 1.0
CB A:ALA382 4.9 23.9 1.0

Reference:

R.A.Gallego, L.Bernier, H.Chen, S.Cho-Schultz, L.Chung, M.Collins, M.Del Bel, J.Elleraas, C.Costa Jones, C.N.Cronin, M.Edwards, X.Fang, T.Fisher, M.He, J.Hoffman, R.Huo, M.Jalaie, E.Johnson, T.W.Johnson, R.S.Kania, M.Kraus, J.Lafontaine, P.Le, T.Liu, M.Maestre, J.Matthews, M.Mctigue, N.Miller, Q.Mu, X.Qin, S.Ren, P.Richardson, A.Rohner, N.Sach, L.Shao, G.Smith, R.Su, B.Sun, S.Timofeevski, P.Tran, S.Wang, W.Wang, R.Zhou, J.Zhu, S.K.Nair. Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1. J.Med.Chem. 2023.
ISSN: ISSN 0022-2623
PubMed: 36940470
DOI: 10.1021/ACS.JMEDCHEM.2C02038
Page generated: Tue Apr 11 13:23:00 2023

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