Atomistry » Chlorine » PDB 8fm5-8ft8 » 8ft4
Atomistry »
  Chlorine »
    PDB 8fm5-8ft8 »
      8ft4 »

Chlorine in PDB 8ft4: Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev

Protein crystallography data

The structure of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev, PDB code: 8ft4 was solved by A.Karasawa, H.Liu, M.Quick, A.H.Hendrickson, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.79 / 4.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 87.11, 86.383, 80.73, 90, 95.53, 90
R / Rfree (%) 15.3 / 20.9

Other elements in 8ft4:

The structure of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev (pdb code 8ft4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev, PDB code: 8ft4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8ft4

Go back to Chlorine Binding Sites List in 8ft4
Chlorine binding site 1 out of 2 in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:75.3
occ:1.00
OG A:SER165 3.2 50.4 1.0
O A:HOH771 3.3 58.7 1.0
CB A:SER165 3.6 59.5 1.0
NZ A:LYS121 3.7 58.6 1.0
CE A:LYS121 4.0 50.5 1.0
CD2 A:TYR151 4.2 43.9 1.0
CB A:PHE167 4.3 46.7 1.0
CD A:LYS121 4.4 47.4 1.0
O A:HOH797 4.4 74.8 1.0
CD2 A:PHE167 4.5 41.4 1.0
CA A:TYR151 4.6 49.3 1.0
O A:SER150 4.7 53.4 1.0
CE2 A:TYR151 4.8 38.4 1.0
CG A:PHE167 4.9 44.5 1.0
CG A:TYR151 4.9 45.1 1.0
CB A:TYR151 5.0 43.4 1.0

Chlorine binding site 2 out of 2 in 8ft4

Go back to Chlorine Binding Sites List in 8ft4
Chlorine binding site 2 out of 2 in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl611

b:88.4
occ:0.50
NE1 A:TRP481 3.9 60.1 1.0
CZ2 A:TRP481 4.1 53.2 1.0
CD A:PRO160 4.3 66.5 1.0
CE2 A:TRP481 4.3 53.3 1.0
CE1 A:HIS480 4.7 62.6 1.0
NE2 A:HIS480 4.8 65.5 1.0
CG A:PRO160 4.9 65.8 1.0

Reference:

A.Karasawa, H.Liu, M.Quick, W.A.Hendrickson, Q.Liu. Crystallographic Characterization of Sodium Ions in A Bacterial Leucine/Sodium Symporter To Be Published.
Page generated: Tue Jul 30 09:47:47 2024

Last articles

Zn in 2YRC
Zn in 2YQP
Zn in 2YR2
Zn in 2YQL
Zn in 2YPT
Zn in 2YPA
Zn in 2YPU
Zn in 2YNW
Zn in 2YNT
Zn in 2YNV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy