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Chlorine in PDB 8ft4: Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev

Protein crystallography data

The structure of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev, PDB code: 8ft4 was solved by A.Karasawa, H.Liu, M.Quick, A.H.Hendrickson, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.79 / 4.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 87.11, 86.383, 80.73, 90, 95.53, 90
R / Rfree (%) 15.3 / 20.9

Other elements in 8ft4:

The structure of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev (pdb code 8ft4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev, PDB code: 8ft4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8ft4

Go back to Chlorine Binding Sites List in 8ft4
Chlorine binding site 1 out of 2 in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:75.3
occ:1.00
OG A:SER165 3.2 50.4 1.0
O A:HOH771 3.3 58.7 1.0
CB A:SER165 3.6 59.5 1.0
NZ A:LYS121 3.7 58.6 1.0
CE A:LYS121 4.0 50.5 1.0
CD2 A:TYR151 4.2 43.9 1.0
CB A:PHE167 4.3 46.7 1.0
CD A:LYS121 4.4 47.4 1.0
O A:HOH797 4.4 74.8 1.0
CD2 A:PHE167 4.5 41.4 1.0
CA A:TYR151 4.6 49.3 1.0
O A:SER150 4.7 53.4 1.0
CE2 A:TYR151 4.8 38.4 1.0
CG A:PHE167 4.9 44.5 1.0
CG A:TYR151 4.9 45.1 1.0
CB A:TYR151 5.0 43.4 1.0

Chlorine binding site 2 out of 2 in 8ft4

Go back to Chlorine Binding Sites List in 8ft4
Chlorine binding site 2 out of 2 in the Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Multicrystal Structure of Na+, Leucine-Bound Leut Determined at 5 Kev within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl611

b:88.4
occ:0.50
NE1 A:TRP481 3.9 60.1 1.0
CZ2 A:TRP481 4.1 53.2 1.0
CD A:PRO160 4.3 66.5 1.0
CE2 A:TRP481 4.3 53.3 1.0
CE1 A:HIS480 4.7 62.6 1.0
NE2 A:HIS480 4.8 65.5 1.0
CG A:PRO160 4.9 65.8 1.0

Reference:

A.Karasawa, H.Liu, M.Quick, W.A.Hendrickson, Q.Liu. Crystallographic Characterization of Sodium Ions in A Bacterial Leucine/Sodium Symporter To Be Published.
Page generated: Thu Dec 28 03:13:40 2023

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