Chlorine in PDB 8fwf: Crystal Structure of Apo Form FAB235
Protein crystallography data
The structure of Crystal Structure of Apo Form FAB235, PDB code: 8fwf
was solved by
K.Tan,
M.Kim,
E.L.Reinherz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
49.59 /
1.94
|
Space group
|
P 42 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
120.755,
120.755,
86.94,
90,
90,
90
|
R / Rfree (%)
|
17.1 /
20.6
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Apo Form FAB235
(pdb code 8fwf). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Crystal Structure of Apo Form FAB235, PDB code: 8fwf:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 8fwf
Go back to
Chlorine Binding Sites List in 8fwf
Chlorine binding site 1 out
of 5 in the Crystal Structure of Apo Form FAB235
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Apo Form FAB235 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Cl301
b:65.6
occ:1.00
|
NH1
|
L:ARG67
|
3.2
|
49.1
|
1.0
|
NZ
|
L:LYS85
|
3.2
|
60.8
|
1.0
|
CG
|
L:PRO65
|
3.5
|
44.0
|
1.0
|
NH2
|
L:ARG67
|
3.9
|
43.6
|
1.0
|
CZ
|
L:ARG67
|
4.0
|
45.2
|
1.0
|
CB
|
L:PRO65
|
4.0
|
43.8
|
1.0
|
CE
|
L:LYS85
|
4.5
|
59.3
|
1.0
|
CD
|
L:LYS85
|
4.5
|
51.8
|
1.0
|
O2
|
L:GOL304
|
4.8
|
60.1
|
1.0
|
OE2
|
L:GLU87
|
4.8
|
61.2
|
1.0
|
CD
|
L:PRO65
|
4.8
|
39.8
|
1.0
|
O
|
L:HOH502
|
4.9
|
51.9
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 8fwf
Go back to
Chlorine Binding Sites List in 8fwf
Chlorine binding site 2 out
of 5 in the Crystal Structure of Apo Form FAB235
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Apo Form FAB235 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl301
b:39.3
occ:0.53
|
CL
|
H:CL301
|
0.0
|
39.3
|
0.5
|
CL
|
H:CL301
|
2.3
|
32.3
|
0.5
|
N
|
H:THR9
|
3.1
|
30.7
|
1.0
|
CA
|
H:GLY8
|
3.4
|
31.2
|
1.0
|
OG1
|
H:THR9
|
3.5
|
30.1
|
1.0
|
CD
|
H:LYS211
|
3.6
|
44.3
|
1.0
|
C
|
H:GLY8
|
3.8
|
30.5
|
1.0
|
CB
|
H:THR9
|
3.9
|
27.8
|
1.0
|
CB
|
H:LYS211
|
3.9
|
40.1
|
1.0
|
CA
|
H:THR9
|
4.1
|
25.7
|
1.0
|
CG
|
H:LYS211
|
4.3
|
41.6
|
1.0
|
O
|
H:HOH445
|
4.5
|
28.3
|
1.0
|
CE
|
H:LYS211
|
4.7
|
51.9
|
1.0
|
NZ
|
H:LYS211
|
4.7
|
56.1
|
1.0
|
N
|
H:GLY8
|
4.8
|
26.6
|
1.0
|
O
|
H:HOH452
|
4.9
|
31.3
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 8fwf
Go back to
Chlorine Binding Sites List in 8fwf
Chlorine binding site 3 out
of 5 in the Crystal Structure of Apo Form FAB235
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Apo Form FAB235 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl301
b:32.3
occ:0.47
|
CL
|
H:CL301
|
0.0
|
32.3
|
0.5
|
CL
|
H:CL301
|
2.3
|
39.3
|
0.5
|
OG1
|
H:THR9
|
2.8
|
30.1
|
1.0
|
O
|
H:HOH452
|
3.2
|
31.3
|
1.0
|
CB
|
H:THR9
|
3.5
|
27.8
|
1.0
|
CD
|
H:PRO159
|
3.7
|
31.8
|
1.0
|
CG
|
H:PRO159
|
3.7
|
27.5
|
1.0
|
CB
|
H:LYS211
|
3.9
|
40.1
|
1.0
|
CD
|
H:LYS211
|
4.1
|
44.3
|
1.0
|
N
|
H:THR9
|
4.2
|
30.7
|
1.0
|
CD
|
H:PRO212
|
4.4
|
34.1
|
1.0
|
CG
|
H:LYS211
|
4.5
|
41.6
|
1.0
|
CA
|
H:THR9
|
4.5
|
25.7
|
1.0
|
O
|
H:HOH445
|
4.6
|
28.3
|
1.0
|
CG2
|
H:THR9
|
4.6
|
28.1
|
1.0
|
O
|
H:PRO159
|
4.7
|
28.1
|
1.0
|
N
|
H:PRO159
|
5.0
|
31.4
|
1.0
|
CG
|
H:PRO212
|
5.0
|
33.9
|
1.0
|
CA
|
H:LYS211
|
5.0
|
37.1
|
1.0
|
N
|
H:LYS211
|
5.0
|
33.0
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 8fwf
Go back to
Chlorine Binding Sites List in 8fwf
Chlorine binding site 4 out
of 5 in the Crystal Structure of Apo Form FAB235
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Apo Form FAB235 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl302
b:64.4
occ:1.00
|
N
|
H:GLY128
|
3.5
|
30.9
|
1.0
|
CA
|
H:LYS127
|
4.2
|
28.7
|
1.0
|
C
|
H:LYS127
|
4.4
|
29.0
|
1.0
|
CA
|
H:GLY128
|
4.4
|
29.9
|
1.0
|
CG
|
H:LYS127
|
4.4
|
29.5
|
1.0
|
CB
|
H:LYS127
|
4.8
|
29.1
|
1.0
|
O
|
H:THR126
|
4.9
|
28.3
|
1.0
|
O
|
H:GLY128
|
4.9
|
27.9
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 8fwf
Go back to
Chlorine Binding Sites List in 8fwf
Chlorine binding site 5 out
of 5 in the Crystal Structure of Apo Form FAB235
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Apo Form FAB235 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl303
b:74.8
occ:1.00
|
N
|
H:SER225
|
3.7
|
58.1
|
1.0
|
OG
|
H:SER225
|
3.9
|
72.0
|
1.0
|
CD
|
H:LYS224
|
4.1
|
68.0
|
1.0
|
CA
|
H:LYS224
|
4.3
|
49.1
|
1.0
|
C
|
H:LYS224
|
4.5
|
55.4
|
1.0
|
CB
|
H:SER225
|
4.6
|
66.5
|
1.0
|
N
|
H:CYS226
|
4.7
|
75.2
|
1.0
|
CA
|
H:SER225
|
4.7
|
64.2
|
1.0
|
CG
|
H:LYS224
|
4.8
|
60.5
|
1.0
|
CB
|
H:LYS224
|
4.9
|
56.7
|
1.0
|
O
|
H:PRO223
|
4.9
|
53.0
|
1.0
|
|
Reference:
K.Tan,
M.Kim,
E.L.Reinherz.
Crystal Structure of Apo Form FAB235 To Be Published.
Page generated: Tue Jul 30 09:49:11 2024
|