Atomistry » Chlorine » PDB 8flm-8g0s » 8fxu
Atomistry »
  Chlorine »
    PDB 8flm-8g0s »
      8fxu »

Chlorine in PDB 8fxu: Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C

Protein crystallography data

The structure of Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C, PDB code: 8fxu was solved by M.J.Allert, S.Kumar, L.S.Beese, H.W.Hellinga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.66 / 1.59
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.49, 53.06, 134.32, 90, 90, 90
R / Rfree (%) 16.1 / 17.8

Other elements in 8fxu:

The structure of Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C (pdb code 8fxu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C, PDB code: 8fxu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8fxu

Go back to Chlorine Binding Sites List in 8fxu
Chlorine binding site 1 out of 2 in the Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:25.2
occ:1.00
ND2 A:ASN262 3.7 17.6 1.0
CG A:ASN262 3.7 19.2 1.0
CD A:PRO298 3.9 13.8 1.0
CB A:ASN262 3.9 12.4 1.0
O A:HOH681 4.0 28.3 1.0
CE2 A:TYR287 4.0 15.1 1.0
CG2 A:ILE297 4.0 12.4 1.0
CD1 A:ILE297 4.0 13.1 1.0
OD1 A:ASN262 4.2 19.2 1.0
CD2 A:TYR287 4.4 12.7 1.0
OD2 A:ASP259 4.4 20.4 1.0
CG A:PRO298 4.8 19.3 1.0
CB A:ILE297 4.8 12.8 1.0
O A:HOH749 4.9 33.1 1.0
CA A:ILE297 4.9 11.1 1.0
CG1 A:ILE297 5.0 13.6 1.0
N A:PRO298 5.0 11.4 1.0

Chlorine binding site 2 out of 2 in 8fxu

Go back to Chlorine Binding Sites List in 8fxu
Chlorine binding site 2 out of 2 in the Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Thermoanaerobacter Thermosaccharolyticum Periplasmic Glucose-Binding Protein Glucose Complex: Badan Conjugate Attached at F17C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:35.1
occ:1.00
NH1 A:ARG184 3.7 23.5 0.5
CG A:HIS188 3.7 11.3 1.0
CB A:HIS188 3.8 9.2 1.0
CD2 A:HIS188 3.8 12.7 1.0
CG A:GLU218 3.9 16.3 0.6
CB A:GLU218 4.1 13.7 0.5
CB A:GLU218 4.1 13.7 0.6
CG A:GLU218 4.3 12.2 0.5
CG A:ARG184 4.4 15.1 0.5
ND1 A:HIS188 4.5 13.3 1.0
NE2 A:HIS188 4.5 18.3 1.0
CD A:ARG184 4.7 18.7 0.5
CG2 A:VAL185 4.7 21.1 1.0
CG A:ARG184 4.7 15.2 0.6
CA A:VAL185 4.8 12.9 1.0
CA A:GLY215 4.9 11.5 1.0
CE1 A:HIS188 4.9 17.8 1.0
O A:ARG184 4.9 11.2 1.0
CZ A:ARG184 4.9 25.5 0.5
NE A:ARG184 4.9 22.6 0.6

Reference:

M.J.Allert, S.Kumar, Y.Wang, L.S.Beese, H.W.Hellinga. Chromophore Carbonyl Twisting in Fluorescent Biosensors Encodes Direct Readout of Protein Conformations with Multicolor Switching. Commun Chem V. 6 168 2023.
ISSN: ESSN 2399-3669
PubMed: 37598249
DOI: 10.1038/S42004-023-00982-7
Page generated: Thu Dec 28 03:13:43 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy