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Chlorine in PDB 8h8n: Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr

Protein crystallography data

The structure of Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr, PDB code: 8h8n was solved by Y.Hishikawa, H.Noya, B.Maity, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.85 / 1.50
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 181.877, 181.877, 181.877, 90, 90, 90
R / Rfree (%) 16 / 17.8

Other elements in 8h8n:

The structure of Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr also contains other interesting chemical elements:

Cadmium (Cd) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr (pdb code 8h8n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr, PDB code: 8h8n:

Chlorine binding site 1 out of 1 in 8h8n

Go back to Chlorine Binding Sites List in 8h8n
Chlorine binding site 1 out of 1 in the Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Apo-R52Y/E56Y/R59Y/E63Y-Rhlfr within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl212

b:13.7
occ:1.00
CD A:CD206 2.5 7.1 0.5
OD1 A:ASP80 3.7 6.4 1.0
CG A:ASP80 4.6 7.1 1.0
OD2 A:ASP80 4.7 8.7 1.0

Reference:

Y.Hishikawa, H.Noya, S.Nagatoishi, T.Yoshidome, B.Maity, K.Tsumoto, S.Abe, T.Ueno. Elucidating Conformational Dynamics and Thermostability of Designed Aromatic Clusters By Using Protein Cages. Chemistry V. 29 00488 2023.
ISSN: ISSN 0947-6539
PubMed: 37070368
DOI: 10.1002/CHEM.202300488
Page generated: Thu Dec 28 03:17:10 2023

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