Chlorine in PDB 8h8t: Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge)

All present enzymatic activity of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge):
3.2.1.17;

The structure of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge), PDB code: 8h8t was solved by Y.Kim, K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	55.78 / 1.70
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.88, 78.88, 38.05, 90, 90, 90
R / Rfree (%)	21.1 / 23.2

The structure of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge) also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge) (pdb code 8h8t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge), PDB code: 8h8t:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:24.9 occ:1.00 ND2 A:ASN131 3.2 18.3 1.0 CB A:ASN131 3.5 13.6 1.0 CG A:ASN131 3.8 18.9 1.0 CA A:ALA128 3.9 12.2 1.0 O A:VAL127 4.0 20.1 1.0 CG1 A:VAL127 4.1 25.6 1.0 N A:ALA128 4.3 13.6 1.0 C A:VAL127 4.3 13.8 1.0 CD A:ARG132 4.3 21.9 1.0 CG A:ARG132 4.4 20.0 1.0 CB A:ALA128 4.5 13.5 1.0 CA A:ASN131 4.8 16.5 1.0 CB A:VAL127 4.9 21.5 1.0 C A:ALA128 5.0 20.2 1.0

Chlorine binding site 2 out of 2 in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (50 Ms, Edge) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:32.6 occ:1.00 N A:GLY44 2.9 13.9 1.0 OG A:SER42 3.1 20.4 1.0 CA A:GLY44 3.4 11.7 1.0 CB A:SER42 3.4 19.4 1.0 CD1 A:ILE142 3.5 41.3 1.0 CA A:GLN139 3.7 24.2 1.0 N A:LEU43 4.0 19.7 1.0 N A:GLN139 4.0 18.2 1.0 C A:LEU43 4.1 14.7 1.0 CB A:GLN139 4.1 34.3 1.0 CG1 A:ILE142 4.1 21.1 1.0 C A:SER42 4.2 19.8 1.0 CG2 A:VAL138 4.3 18.8 1.0 O A:VAL138 4.3 21.0 1.0 C A:VAL138 4.3 23.0 1.0 CG A:GLN139 4.3 47.6 1.0 CA A:SER42 4.5 15.4 1.0 CA A:LEU43 4.5 19.8 1.0 C A:GLY44 4.5 13.2 1.0 N A:ASN45 4.7 10.2 1.0 O A:SER42 4.7 16.0 1.0 CB A:LEU43 4.8 16.0 1.0 C A:GLN139 4.9 23.8 1.0 CB A:VAL138 5.0 17.3 1.0

Y.Kim, K.H.Nam. Pink-Beam Serial Synchrotron Crystallography at Pohang Light Source II Crystals V. 12 2022.
ISSN: ESSN 2073-4352
DOI: 10.3390/CRYST12111637