Chlorine in PDB 8h8w: Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center)

All present enzymatic activity of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center):
3.2.1.17;

The structure of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center), PDB code: 8h8w was solved by Y.Kim, K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	55.78 / 1.70
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.88, 78.88, 38.05, 90, 90, 90
R / Rfree (%)	22.7 / 25.6

The structure of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center) also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center) (pdb code 8h8w). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center), PDB code: 8h8w:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:21.7 occ:1.00 ND2 A:ASN131 3.3 15.5 1.0 CB A:ASN131 3.5 10.6 1.0 CA A:ALA128 3.9 11.2 1.0 CG A:ASN131 3.9 15.8 1.0 O A:VAL127 4.1 12.3 1.0 CG1 A:VAL127 4.1 21.7 1.0 N A:ALA128 4.2 13.1 1.0 C A:VAL127 4.3 9.8 1.0 CD A:ARG132 4.4 16.1 1.0 CG A:ARG132 4.4 17.9 1.0 CB A:ALA128 4.5 14.7 1.0 CB A:VAL127 4.8 19.6 1.0 CA A:ASN131 4.9 14.5 1.0 C A:ALA128 5.0 14.9 1.0

Chlorine binding site 2 out of 2 in the Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Room-Temperature Structure of Lysozyme By Pink-Beam Serial Crystallography (100 Ms, Center) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:28.2 occ:1.00 O A:HOH347 1.9 39.7 1.0 O A:HOH378 3.0 36.9 1.0 N A:GLY44 3.0 11.8 1.0 OG A:SER42 3.1 18.4 1.0 CD1 A:ILE142 3.4 33.8 1.0 CB A:SER42 3.4 16.1 1.0 CA A:GLY44 3.5 10.5 1.0 CA A:GLN139 3.7 26.7 1.0 N A:LEU43 4.0 16.4 1.0 N A:GLN139 4.1 23.9 1.0 CG1 A:ILE142 4.1 19.9 1.0 C A:LEU43 4.2 14.3 1.0 O A:VAL138 4.2 16.5 1.0 C A:SER42 4.3 16.1 1.0 C A:VAL138 4.3 21.2 1.0 CG2 A:VAL138 4.4 22.6 1.0 CB A:GLN139 4.5 30.9 1.0 CG A:GLN139 4.5 36.6 1.0 CA A:SER42 4.5 15.8 1.0 C A:GLY44 4.6 11.8 1.0 CA A:LEU43 4.6 14.5 1.0 N A:ASN45 4.7 11.6 1.0 C A:GLN139 4.7 20.4 1.0 O A:SER42 4.8 12.7 1.0 CB A:LEU43 4.9 14.7 1.0 O A:GLN139 4.9 22.5 1.0 CB A:VAL138 5.0 20.7 1.0

Y.Kim, K.H.Nam. Pink-Beam Serial Synchrotron Crystallography at Pohang Light Source II Crystals V. 12 2022.
ISSN: ESSN 2073-4352
DOI: 10.3390/CRYST12111637