Chlorine in PDB 8hnu: Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
(pdb code 8hnu). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum, PDB code: 8hnu:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 8hnu
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Chlorine Binding Sites List in 8hnu
Chlorine binding site 1 out
of 4 in the Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1001
b:111.8
occ:1.00
|
N
|
A:GLN491
|
3.0
|
85.7
|
1.0
|
N
|
A:THR492
|
3.3
|
86.4
|
1.0
|
N
|
A:LEU888
|
3.4
|
89.6
|
1.0
|
OG1
|
A:THR492
|
3.5
|
89.7
|
1.0
|
CB
|
A:PRO887
|
3.5
|
88.7
|
1.0
|
CA
|
A:GLY490
|
3.5
|
73.4
|
1.0
|
C
|
A:GLY490
|
3.6
|
81.8
|
1.0
|
CA
|
A:PRO887
|
3.7
|
88.8
|
1.0
|
NE2
|
A:HIS141
|
3.8
|
80.8
|
1.0
|
CD2
|
A:HIS141
|
3.8
|
79.2
|
1.0
|
CA
|
A:GLN491
|
3.8
|
78.8
|
1.0
|
N
|
A:GLN493
|
3.9
|
94.5
|
1.0
|
CB
|
A:GLN491
|
4.0
|
79.4
|
1.0
|
C
|
A:PRO887
|
4.0
|
89.7
|
1.0
|
C
|
A:GLN491
|
4.0
|
83.2
|
1.0
|
CD1
|
A:LEU888
|
4.1
|
88.6
|
1.0
|
CA
|
A:THR492
|
4.2
|
86.7
|
1.0
|
CG
|
A:LEU888
|
4.2
|
88.4
|
1.0
|
CB
|
A:LEU888
|
4.3
|
90.1
|
1.0
|
CB
|
A:THR492
|
4.4
|
86.3
|
1.0
|
CA
|
A:LEU888
|
4.4
|
92.2
|
1.0
|
C
|
A:THR492
|
4.5
|
88.5
|
1.0
|
CB
|
A:GLN493
|
4.5
|
99.0
|
1.0
|
O
|
A:GLY490
|
4.6
|
83.8
|
1.0
|
N
|
A:GLY490
|
4.7
|
77.9
|
1.0
|
CA
|
A:GLN493
|
4.9
|
94.4
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 8hnu
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Chlorine Binding Sites List in 8hnu
Chlorine binding site 2 out
of 4 in the Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1002
b:105.0
occ:1.00
|
ND2
|
A:ASN624
|
2.7
|
96.2
|
1.0
|
O
|
A:HOH1160
|
3.1
|
98.7
|
1.0
|
NE
|
A:ARG718
|
3.4
|
80.5
|
1.0
|
ND2
|
A:ASN752
|
3.4
|
87.7
|
1.0
|
NH2
|
A:ARG718
|
3.5
|
76.6
|
1.0
|
CB
|
A:ASN624
|
3.5
|
94.5
|
1.0
|
CG
|
A:ASN624
|
3.5
|
93.0
|
1.0
|
CB
|
A:ASN752
|
3.7
|
77.3
|
1.0
|
CZ
|
A:ARG718
|
3.9
|
80.5
|
1.0
|
CD2
|
A:PHE750
|
3.9
|
78.1
|
1.0
|
CG
|
A:ASN752
|
4.1
|
85.5
|
1.0
|
CE3
|
A:TRP623
|
4.2
|
91.1
|
1.0
|
CZ3
|
A:TRP623
|
4.2
|
87.9
|
1.0
|
CD1
|
A:LEU787
|
4.4
|
91.2
|
1.0
|
CD
|
A:ARG718
|
4.5
|
77.0
|
1.0
|
CE2
|
A:PHE750
|
4.6
|
77.8
|
1.0
|
CA
|
A:ASN624
|
4.6
|
94.4
|
1.0
|
OD1
|
A:ASN624
|
4.7
|
96.7
|
1.0
|
SD
|
A:MET667
|
4.7
|
99.6
|
1.0
|
CG
|
A:PHE750
|
4.8
|
81.8
|
1.0
|
N
|
A:ASN624
|
4.9
|
96.2
|
1.0
|
CB
|
A:PHE750
|
4.9
|
75.8
|
1.0
|
CA
|
A:ASN752
|
5.0
|
80.1
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 8hnu
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Chlorine Binding Sites List in 8hnu
Chlorine binding site 3 out
of 4 in the Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1001
b:111.9
occ:1.00
|
N
|
B:GLN491
|
3.0
|
86.5
|
1.0
|
N
|
B:THR492
|
3.3
|
88.4
|
1.0
|
N
|
B:LEU888
|
3.4
|
91.0
|
1.0
|
OG1
|
B:THR492
|
3.5
|
90.5
|
1.0
|
CB
|
B:PRO887
|
3.5
|
87.9
|
1.0
|
CA
|
B:GLY490
|
3.5
|
73.5
|
1.0
|
C
|
B:GLY490
|
3.6
|
82.6
|
1.0
|
CA
|
B:PRO887
|
3.7
|
88.7
|
1.0
|
NE2
|
B:HIS141
|
3.8
|
81.2
|
1.0
|
CD2
|
B:HIS141
|
3.8
|
80.0
|
1.0
|
CA
|
B:GLN491
|
3.8
|
79.4
|
1.0
|
N
|
B:GLN493
|
3.9
|
95.0
|
1.0
|
CB
|
B:GLN491
|
4.0
|
79.4
|
1.0
|
C
|
B:PRO887
|
4.0
|
90.2
|
1.0
|
C
|
B:GLN491
|
4.0
|
84.0
|
1.0
|
CD1
|
B:LEU888
|
4.1
|
88.9
|
1.0
|
CA
|
B:THR492
|
4.2
|
88.9
|
1.0
|
CG
|
B:LEU888
|
4.2
|
89.2
|
1.0
|
CB
|
B:LEU888
|
4.3
|
91.4
|
1.0
|
CB
|
B:THR492
|
4.4
|
87.5
|
1.0
|
CA
|
B:LEU888
|
4.4
|
92.5
|
1.0
|
C
|
B:THR492
|
4.5
|
90.0
|
1.0
|
CB
|
B:GLN493
|
4.5
|
98.3
|
1.0
|
O
|
B:GLY490
|
4.6
|
84.6
|
1.0
|
N
|
B:GLY490
|
4.7
|
78.3
|
1.0
|
CA
|
B:GLN493
|
4.9
|
94.3
|
1.0
|
CG
|
B:PRO887
|
5.0
|
86.4
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 8hnu
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Chlorine Binding Sites List in 8hnu
Chlorine binding site 4 out
of 4 in the Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Cellodextrin Phosphorylase Stable Variant From Clostridium Thermocellum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1002
b:105.5
occ:1.00
|
ND2
|
B:ASN624
|
2.7
|
98.3
|
1.0
|
O
|
B:HOH1156
|
3.2
|
99.9
|
1.0
|
NE
|
B:ARG718
|
3.4
|
79.3
|
1.0
|
ND2
|
B:ASN752
|
3.4
|
87.6
|
1.0
|
NH2
|
B:ARG718
|
3.5
|
77.1
|
1.0
|
CB
|
B:ASN624
|
3.5
|
95.8
|
1.0
|
CG
|
B:ASN624
|
3.5
|
94.2
|
1.0
|
CB
|
B:ASN752
|
3.7
|
77.3
|
1.0
|
CZ
|
B:ARG718
|
3.9
|
79.8
|
1.0
|
CD2
|
B:PHE750
|
3.9
|
78.2
|
1.0
|
CG
|
B:ASN752
|
4.1
|
86.0
|
1.0
|
CE3
|
B:TRP623
|
4.2
|
91.1
|
1.0
|
CZ3
|
B:TRP623
|
4.2
|
87.6
|
1.0
|
CD1
|
B:LEU787
|
4.4
|
90.6
|
1.0
|
CD
|
B:ARG718
|
4.5
|
77.7
|
1.0
|
CE2
|
B:PHE750
|
4.6
|
77.4
|
1.0
|
CA
|
B:ASN624
|
4.6
|
96.0
|
1.0
|
OD1
|
B:ASN624
|
4.7
|
97.8
|
1.0
|
SD
|
B:MET667
|
4.7
|
99.2
|
1.0
|
CG
|
B:PHE750
|
4.8
|
82.8
|
1.0
|
N
|
B:ASN624
|
4.8
|
97.7
|
1.0
|
CB
|
B:PHE750
|
4.9
|
77.0
|
1.0
|
CG
|
B:LEU787
|
4.9
|
92.3
|
1.0
|
CA
|
B:ASN752
|
5.0
|
80.7
|
1.0
|
|
Reference:
T.Kuga,
N.Sunagawa,
K.Igarashi.
11 Cysteine-to-Serine Mutations Improve the Stability of Cellodextrin Phosphorylase To Be Published.
Page generated: Tue Jul 30 10:21:25 2024
|