Chlorine in PDB 8hug: F1 in Complex with CRM1-Ran-RANBP1
Protein crystallography data
The structure of F1 in Complex with CRM1-Ran-RANBP1, PDB code: 8hug
was solved by
Q.Sun,
Y.Lei,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
30.84 /
2.15
|
Space group
|
P 43 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
105.57,
105.57,
304,
90,
90,
90
|
R / Rfree (%)
|
18.7 /
22.4
|
Other elements in 8hug:
The structure of F1 in Complex with CRM1-Ran-RANBP1 also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the F1 in Complex with CRM1-Ran-RANBP1
(pdb code 8hug). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
F1 in Complex with CRM1-Ran-RANBP1, PDB code: 8hug:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 8hug
Go back to
Chlorine Binding Sites List in 8hug
Chlorine binding site 1 out
of 4 in the F1 in Complex with CRM1-Ran-RANBP1
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of F1 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1101
b:85.1
occ:1.00
|
O
|
C:ARG325
|
3.5
|
45.4
|
1.0
|
N
|
C:ALA328
|
3.6
|
50.5
|
1.0
|
N
|
C:ARG327
|
3.7
|
47.1
|
1.0
|
C
|
C:ARG325
|
3.8
|
47.3
|
1.0
|
O
|
C:ALA324
|
3.9
|
50.6
|
1.0
|
CB
|
C:ALA328
|
4.0
|
51.5
|
1.0
|
CG
|
C:ARG327
|
4.0
|
48.3
|
1.0
|
N
|
C:ASN326
|
4.1
|
44.6
|
1.0
|
O
|
C:HOH1610
|
4.1
|
65.9
|
1.0
|
C
|
C:ASN326
|
4.3
|
46.2
|
1.0
|
O
|
C:LEU323
|
4.3
|
48.0
|
1.0
|
CA
|
C:ALA328
|
4.4
|
53.1
|
1.0
|
CA
|
C:ASN326
|
4.5
|
45.8
|
1.0
|
C
|
C:ARG327
|
4.5
|
49.8
|
1.0
|
CA
|
C:ARG327
|
4.5
|
50.0
|
1.0
|
C
|
C:ALA324
|
4.5
|
47.1
|
1.0
|
CA
|
C:ARG325
|
4.6
|
48.1
|
1.0
|
O
|
C:HOH1479
|
4.6
|
81.3
|
1.0
|
O
|
C:HOH1480
|
4.7
|
66.4
|
1.0
|
NE
|
C:ARG327
|
4.7
|
48.3
|
1.0
|
CB
|
C:ARG327
|
4.8
|
49.7
|
1.0
|
N
|
C:ARG325
|
4.9
|
47.2
|
1.0
|
CZ
|
C:ARG327
|
5.0
|
48.9
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 8hug
Go back to
Chlorine Binding Sites List in 8hug
Chlorine binding site 2 out
of 4 in the F1 in Complex with CRM1-Ran-RANBP1
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of F1 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1102
b:90.2
occ:1.00
|
NH1
|
C:ARG77
|
3.5
|
86.2
|
1.0
|
O
|
C:LYS1040
|
3.9
|
56.8
|
1.0
|
C
|
C:LYS1040
|
4.1
|
55.7
|
1.0
|
NE2
|
C:HIS1005
|
4.3
|
51.5
|
1.0
|
N
|
C:GLU1041
|
4.3
|
54.9
|
1.0
|
CD2
|
C:HIS1005
|
4.3
|
51.2
|
1.0
|
CA
|
C:GLU1041
|
4.4
|
57.5
|
1.0
|
O
|
C:ILE1039
|
4.4
|
53.6
|
1.0
|
CG2
|
C:VAL1042
|
4.5
|
57.5
|
1.0
|
C
|
C:GLU1041
|
4.5
|
55.1
|
1.0
|
CE1
|
C:HIS1005
|
4.5
|
50.9
|
1.0
|
CZ
|
C:ARG77
|
4.5
|
84.1
|
1.0
|
O
|
C:ARG77
|
4.6
|
59.4
|
1.0
|
CG
|
C:HIS1005
|
4.7
|
51.0
|
1.0
|
O
|
C:GLU1041
|
4.7
|
52.9
|
1.0
|
ND1
|
C:HIS1005
|
4.7
|
51.7
|
1.0
|
CB
|
C:ARG77
|
4.8
|
66.0
|
1.0
|
CA
|
C:LYS1040
|
4.9
|
55.9
|
1.0
|
N
|
C:VAL1042
|
4.9
|
53.0
|
1.0
|
CE
|
C:LYS78
|
4.9
|
74.4
|
1.0
|
O
|
C:HOH1611
|
5.0
|
81.5
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 8hug
Go back to
Chlorine Binding Sites List in 8hug
Chlorine binding site 3 out
of 4 in the F1 in Complex with CRM1-Ran-RANBP1
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of F1 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1108
b:30.0
occ:1.00
|
O
|
C:HOH1459
|
3.6
|
62.8
|
1.0
|
NE2
|
C:HIS609
|
3.7
|
61.4
|
1.0
|
CD
|
C:LYS567
|
3.8
|
64.7
|
1.0
|
CE
|
C:LYS567
|
3.9
|
66.5
|
1.0
|
CD2
|
C:HIS609
|
4.0
|
62.5
|
1.0
|
NZ
|
C:LYS567
|
4.2
|
71.8
|
1.0
|
CB
|
C:TYR608
|
4.3
|
65.8
|
1.0
|
CG
|
C:LYS567
|
4.4
|
62.1
|
1.0
|
CD1
|
C:TYR608
|
4.5
|
74.1
|
1.0
|
CG
|
C:TYR608
|
4.6
|
70.4
|
1.0
|
CE1
|
C:HIS609
|
4.9
|
65.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 8hug
Go back to
Chlorine Binding Sites List in 8hug
Chlorine binding site 4 out
of 4 in the F1 in Complex with CRM1-Ran-RANBP1
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of F1 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1110
b:109.6
occ:1.00
|
CL7
|
C:N591110
|
0.0
|
109.6
|
1.0
|
C05
|
C:N591110
|
1.8
|
103.6
|
1.0
|
C06
|
C:N591110
|
2.7
|
102.2
|
1.0
|
C04
|
C:N591110
|
2.8
|
103.8
|
1.0
|
CG
|
C:MET556
|
3.8
|
60.8
|
1.0
|
CG2
|
C:ILE555
|
3.9
|
60.0
|
1.0
|
C01
|
C:N591110
|
4.0
|
105.5
|
1.0
|
CA
|
C:MET556
|
4.1
|
57.2
|
1.0
|
N
|
C:MET556
|
4.1
|
56.2
|
1.0
|
C03
|
C:N591110
|
4.1
|
103.4
|
1.0
|
CD2
|
C:LEU580
|
4.5
|
57.0
|
1.0
|
C
|
C:ILE555
|
4.5
|
57.4
|
1.0
|
CB
|
C:MET556
|
4.5
|
58.6
|
1.0
|
CE2
|
C:PHE583
|
4.5
|
72.3
|
1.0
|
C02
|
C:N591110
|
4.6
|
104.2
|
1.0
|
CB
|
C:LYS579
|
4.7
|
71.0
|
1.0
|
CG1
|
C:VAL576
|
4.7
|
57.4
|
1.0
|
CB
|
C:ILE555
|
4.7
|
58.2
|
1.0
|
O
|
C:ILE555
|
4.7
|
56.3
|
1.0
|
CG
|
C:LYS579
|
4.7
|
76.3
|
1.0
|
CG2
|
C:VAL559
|
4.8
|
60.1
|
1.0
|
O
|
C:VAL576
|
4.9
|
54.5
|
1.0
|
|
Reference:
Q.Sun,
Y.Lei.
F1 in Complex with CRM1-Ran-RANBP1 To Be Published.
Page generated: Tue Jul 30 10:22:28 2024
|