Chlorine in PDB 8it5: Phosphoglycerate Mutase 1 Complexed with A Compound

Enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound

All present enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it5 was solved by L.Zhou, L.L.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.89 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.377, 85.362, 102.577, 90, 90, 90
R / Rfree (%) 18.9 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 Complexed with A Compound (pdb code 8it5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8it5

Go back to Chlorine Binding Sites List in 8it5
Chlorine binding site 1 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:41.8
occ:1.00
NH1 C:ARG83 3.2 37.2 1.0
NH2 B:ARG83 3.2 37.3 1.0
NH2 C:ARG83 3.3 37.9 1.0
NH1 B:ARG83 3.3 36.4 1.0
NE1 B:TRP68 3.4 41.2 1.0
NE1 C:TRP68 3.4 39.0 1.0
CZ C:ARG83 3.7 40.5 1.0
CZ B:ARG83 3.7 39.9 1.0
CG2 B:VAL81 4.0 40.1 1.0
CB B:VAL81 4.1 37.2 1.0
CG2 C:VAL81 4.1 36.6 1.0
CB C:VAL81 4.1 39.4 1.0
CE2 C:TRP68 4.2 37.4 1.0
CE2 B:TRP68 4.3 36.4 1.0
CD1 B:TRP68 4.3 33.2 1.0
CD1 C:TRP68 4.3 36.4 1.0
CG1 B:VAL81 4.3 40.4 1.0
CG1 C:VAL81 4.3 33.5 1.0
CZ2 C:TRP68 4.5 37.3 1.0
CZ2 B:TRP68 4.5 37.8 1.0

Chlorine binding site 2 out of 2 in 8it5

Go back to Chlorine Binding Sites List in 8it5
Chlorine binding site 2 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:62.6
occ:1.00
CL01 C:QAI302 0.0 62.6 1.0
C02 C:QAI302 1.8 54.6 1.0
C03 C:QAI302 2.7 56.5 1.0
C31 C:QAI302 2.7 55.3 1.0
NH2 C:ARG90 3.2 45.0 1.0
CZ C:ARG90 3.7 50.6 1.0
CD1 C:TYR92 3.9 46.6 1.0
CB C:PRO123 3.9 52.7 1.0
CD C:PRO123 3.9 47.5 1.0
CG C:PRO123 3.9 50.7 1.0
NH1 C:ARG90 3.9 46.2 1.0
C04 C:QAI302 4.0 52.9 1.0
CB C:TRP115 4.0 51.2 1.0
C30 C:QAI302 4.0 55.9 1.0
CE1 C:TYR92 4.1 46.4 1.0
CD1 C:LEU95 4.2 43.5 1.0
C05 C:QAI302 4.5 57.6 1.0
CG C:TRP115 4.5 51.1 1.0
O C:TRP115 4.5 55.9 1.0
NE C:ARG90 4.5 49.1 1.0
N C:PRO123 4.6 51.2 1.0
CA C:PRO123 4.7 47.7 1.0
C C:TRP115 4.8 52.3 1.0
CA C:TRP115 4.9 54.1 1.0

Reference:

L.Zhou, L.L.Jiang. Phosphoglycerate Mutase 1 Complexed with A Compound To Be Published.
Page generated: Tue Jul 30 10:46:39 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy