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Chlorine in PDB 8iwh: Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana

Enzymatic activity of Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana

All present enzymatic activity of Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana:
1.10.3.9;

Other elements in 8iwh:

The structure of Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Manganese (Mn) 8 atoms
Iron (Fe) 6 atoms
Magnesium (Mg) 191 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana (pdb code 8iwh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana, PDB code: 8iwh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8iwh

Go back to Chlorine Binding Sites List in 8iwh
Chlorine binding site 1 out of 2 in the Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:92.9
occ:1.00
 N A:ASN338 3.4 76.4 1.0
N C:GLU352 3.4 77.7 1.0
CD2 A:PHE339 3.7 73.9 1.0
CB C:GLU352 3.9 77.7 1.0
CA A:HIS337 4.0 76.1 1.0
N A:PHE339 4.0 73.9 1.0
CA C:GLY351 4.2 76.6 1.0
C A:HIS337 4.2 76.1 1.0
CA A:ASN338 4.2 76.4 1.0
CB A:ASN338 4.2 76.4 1.0
CA C:GLU352 4.3 77.7 1.0
C C:GLY351 4.3 76.6 1.0
CE2 A:PHE339 4.4 73.9 1.0
O A:ALA336 4.5 75.7 1.0
CG A:PHE339 4.5 73.9 1.0
CB A:PHE339 4.5 73.9 1.0
C A:ASN338 4.5 76.4 1.0
CB A:HIS337 4.5 76.1 1.0
CA A:PHE339 4.8 73.9 1.0
N C:THR353 4.9 74.2 1.0
OE1 C:GLU352 4.9 77.7 1.0

Chlorine binding site 2 out of 2 in 8iwh

Go back to Chlorine Binding Sites List in 8iwh
Chlorine binding site 2 out of 2 in the Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl406

b:101.0
occ:1.00
 N c:GLU352 3.3 86.3 1.0
N a:ASN338 3.5 87.7 1.0
CB c:GLU352 3.5 86.3 1.0
CD2 a:PHE339 3.9 88.7 1.0
CA a:HIS337 4.0 84.2 1.0
CA c:GLU352 4.0 86.3 1.0
N a:PHE339 4.2 88.7 1.0
CA c:GLY351 4.2 87.0 1.0
C a:HIS337 4.2 84.2 1.0
C c:GLY351 4.2 87.0 1.0
O a:ALA336 4.3 82.6 1.0
CA a:ASN338 4.4 87.7 1.0
CB a:ASN338 4.4 87.7 1.0
OE1 c:GLU352 4.5 86.3 1.0
CB a:HIS337 4.6 84.2 1.0
CE2 a:PHE339 4.6 88.7 1.0
CG a:PHE339 4.7 88.7 1.0
CB a:PHE339 4.7 88.7 1.0
C a:ASN338 4.7 87.7 1.0
N c:THR353 4.7 85.4 1.0
C c:GLU352 4.8 86.3 1.0
CG c:GLU352 4.9 86.3 1.0
CD2 a:HIS337 4.9 84.2 1.0

Reference:

Y.Feng, Z.H.Li, X.Y.Li, L.Shen, X.Y.Liu, C.Zhou, J.Y.Zhang, M.Sang, G.Y.Han, W.Q.Yang, T.Kuang, W.D.Wang, J.R.Shen. Structure of A Diatom Photosystem II Supercomplex Containing A Member of Lhcx Family and Dimeric Fcpii Sci Adv 2023.
ISSN: ESSN 2375-2548
DOI: 10.1126/SCIADV.ADI8446
Page generated: Tue Jul 30 10:52:29 2024

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