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Chlorine in PDB 8jsz: Crystal Structure of A Uridylate Cyclase From Anabaena Sp.

Enzymatic activity of Crystal Structure of A Uridylate Cyclase From Anabaena Sp.

All present enzymatic activity of Crystal Structure of A Uridylate Cyclase From Anabaena Sp.:
4.6.1.26;

Protein crystallography data

The structure of Crystal Structure of A Uridylate Cyclase From Anabaena Sp., PDB code: 8jsz was solved by Y.-C.Wang, C.-S.Yang, M.-H.Hou, Y.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.05 / 1.83
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 47.661, 50.792, 71.391, 71.21, 83.96, 62.07
R / Rfree (%) 17.7 / 17.9

Other elements in 8jsz:

The structure of Crystal Structure of A Uridylate Cyclase From Anabaena Sp. also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Uridylate Cyclase From Anabaena Sp. (pdb code 8jsz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Uridylate Cyclase From Anabaena Sp., PDB code: 8jsz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8jsz

Go back to Chlorine Binding Sites List in 8jsz
Chlorine binding site 1 out of 2 in the Crystal Structure of A Uridylate Cyclase From Anabaena Sp.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Uridylate Cyclase From Anabaena Sp. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:19.7
occ:1.00
O B:HOH510 2.9 37.2 1.0
O B:HOH533 3.1 13.5 1.0
O B:HOH632 3.2 17.1 1.0
N A:VAL71 3.4 14.4 1.0
CG2 A:VAL71 3.6 16.6 1.0
CA A:SER70 3.8 12.5 1.0
NZ B:LYS157 3.8 29.1 1.0
O A:HOH643 3.9 27.6 1.0
OG A:SER70 3.9 14.6 1.0
CG B:LYS185 4.1 17.8 1.0
C A:SER70 4.1 15.0 1.0
O A:LEU69 4.3 20.1 1.0
CB A:SER70 4.3 17.0 1.0
CA A:VAL71 4.4 14.9 1.0
CB A:VAL71 4.5 15.2 1.0
CD B:LYS157 4.5 20.8 1.0
CE B:LYS157 4.5 27.3 1.0
N A:THR72 4.6 12.2 1.0
OG1 A:THR72 4.6 17.1 1.0
NZ B:LYS185 4.6 27.0 1.0
O B:HOH503 4.7 36.4 1.0
CE B:LYS185 4.8 29.8 1.0
CG1 A:VAL71 4.8 13.4 1.0
CG2 A:THR72 4.9 24.3 1.0
N A:SER70 4.9 17.4 1.0
C A:VAL71 4.9 14.8 1.0
CG B:LYS157 5.0 16.5 1.0

Chlorine binding site 2 out of 2 in 8jsz

Go back to Chlorine Binding Sites List in 8jsz
Chlorine binding site 2 out of 2 in the Crystal Structure of A Uridylate Cyclase From Anabaena Sp.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Uridylate Cyclase From Anabaena Sp. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:20.2
occ:1.00
O B:HOH634 3.0 38.8 1.0
O A:HOH549 3.1 13.6 1.0
O A:HOH692 3.3 17.4 1.0
N B:VAL71 3.4 13.8 1.0
CG2 B:VAL71 3.6 17.0 1.0
CA B:SER70 3.8 12.4 1.0
OG B:SER70 3.9 15.4 1.0
O B:HOH646 4.0 30.6 1.0
C B:SER70 4.1 17.3 1.0
CG A:LYS185 4.1 19.8 1.0
CE A:LYS157 4.2 26.5 1.0
CB B:SER70 4.3 16.7 1.0
O B:LEU69 4.3 23.5 1.0
CA B:VAL71 4.4 14.0 1.0
CB B:VAL71 4.5 11.7 1.0
N B:THR72 4.5 11.6 1.0
OG1 B:THR72 4.5 15.6 1.0
NZ A:LYS185 4.7 24.0 1.0
CG A:LYS157 4.8 25.9 1.0
CG2 B:THR72 4.8 20.4 1.0
CE A:LYS185 4.8 36.3 1.0
CG1 B:VAL71 4.8 10.9 1.0
C B:VAL71 4.9 12.7 1.0
N B:SER70 4.9 16.6 1.0

Reference:

Y.-C.Wang, C.-S.Yang, M.-H.Hou, Y.Chen. Crystal Structure of A Uridylate Cyclase From Anabaena Sp. To Be Published.
Page generated: Tue Jul 30 11:01:08 2024

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