Chlorine in PDB 8ouv: Crystal Structure of D1228V C-Met Bound By Compound 15

Enzymatic activity of Crystal Structure of D1228V C-Met Bound By Compound 15

All present enzymatic activity of Crystal Structure of D1228V C-Met Bound By Compound 15:
2.7.10.1;

Protein crystallography data

The structure of Crystal Structure of D1228V C-Met Bound By Compound 15, PDB code: 8ouv was solved by G.W.Collie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 107.97 / 1.78
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.772, 56.229, 215.948, 90, 90, 90
R / Rfree (%) 19.1 / 22

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of D1228V C-Met Bound By Compound 15 (pdb code 8ouv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of D1228V C-Met Bound By Compound 15, PDB code: 8ouv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8ouv

Go back to Chlorine Binding Sites List in 8ouv
Chlorine binding site 1 out of 2 in the Crystal Structure of D1228V C-Met Bound By Compound 15


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of D1228V C-Met Bound By Compound 15 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1401

b:35.3
occ:1.00
O B:HOH1559 3.1 31.0 1.0
N B:ALA1226 3.1 26.4 1.0
O B:HOH1574 3.2 31.9 1.0
NH1 B:ARG1114 3.5 32.2 1.0
CB B:ALA1226 3.6 26.3 1.0
CD B:ARG1114 3.7 30.9 1.0
CD2 B:LEU1225 3.9 31.4 1.0
CB B:ARG1114 4.0 31.2 1.0
CA B:ALA1226 4.0 26.2 1.0
CA B:LEU1225 4.0 28.3 1.0
CB B:LEU1225 4.0 28.5 1.0
C B:LEU1225 4.1 27.6 1.0
CG B:ARG1114 4.1 31.1 1.0
CZ B:ARG1114 4.4 31.3 1.0
CA B:PHE1089 4.5 35.4 1.0
NE B:ARG1114 4.5 30.8 1.0
CB B:PHE1089 4.5 34.6 1.0
CG B:LEU1225 4.6 30.4 1.0
O B:ALA1226 4.7 24.9 1.0
CG1 B:ILE1115 4.8 39.7 1.0
C B:ALA1226 4.9 26.0 1.0
CG1 B:VAL1237 5.0 29.3 1.0

Chlorine binding site 2 out of 2 in 8ouv

Go back to Chlorine Binding Sites List in 8ouv
Chlorine binding site 2 out of 2 in the Crystal Structure of D1228V C-Met Bound By Compound 15


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of D1228V C-Met Bound By Compound 15 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1402

b:31.7
occ:1.00
O B:HOH1729 3.0 48.5 1.0
N B:LYS1248 3.2 21.3 1.0
O B:HOH1717 3.2 40.5 1.0
N B:VAL1247 3.5 22.8 1.0
CB B:LYS1248 3.7 22.7 1.0
C B:PRO1246 3.7 24.0 1.0
CZ3 B:TRP1249 3.8 23.0 1.0
CG B:LYS1248 3.8 24.6 1.0
CA B:PRO1246 3.9 25.3 1.0
CG2 B:VAL1247 3.9 27.7 1.0
O B:LEU1245 4.0 28.1 1.0
CE3 B:TRP1249 4.0 21.2 1.0
CA B:LYS1248 4.0 21.9 1.0
CD B:LYS1248 4.1 27.6 1.0
C B:VAL1247 4.2 22.4 1.0
CA B:VAL1247 4.2 23.7 1.0
O B:PRO1246 4.4 22.2 1.0
CD B:LYS1244 4.6 46.2 1.0
CB B:VAL1247 4.7 26.3 1.0
CG2 B:THR1289 4.8 32.5 1.0
C B:LEU1245 4.9 28.2 1.0
N B:PRO1246 4.9 26.5 1.0
C B:LYS1248 4.9 22.0 1.0
CB B:PRO1246 4.9 25.9 1.0
O B:HOH1600 5.0 52.8 1.0

Reference:

I.N.Michaelides, G.W.Collie, U.Borjesson, C.Vasalou, O.Alkhatib, L.Barlind, T.Cheung, I.L.Dale, K.J.Embrey, E.J.Hennessy, P.Khurana, C.M.Koh, M.L.Lamb, J.Liu, T.A.Moss, D.J.O'neill, C.Phillips, J.Shaw, A.Snijder, R.I.Storer, C.J.Stubbs, F.Han, C.Li, J.Qiao, D.Q.Sun, J.Wang, P.Wang, W.Yang. Discovery and Optimization of the First Atp Competitive Type-III C-Met Inhibitor. J.Med.Chem. 2023.
ISSN: ISSN 0022-2623
PubMed: 37343272
DOI: 10.1021/ACS.JMEDCHEM.3C00401
Page generated: Tue Jul 30 11:18:27 2024

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