Chlorine in PDB 8p9s: Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482

Protein crystallography data

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482, PDB code: 8p9s was solved by K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.32 / 1.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.652, 67.949, 40.398, 90, 93.46, 90
R / Rfree (%) 12 / 13.7

Other elements in 8p9s:

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482 (pdb code 8p9s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482, PDB code: 8p9s:

Chlorine binding site 1 out of 1 in 8p9s

Go back to Chlorine Binding Sites List in 8p9s
Chlorine binding site 1 out of 1 in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:21.4
occ:1.00
CL1 A:XCB303 0.0 21.4 1.0
C31 A:XCB303 1.7 18.7 1.0
C33 A:XCB303 2.7 16.3 1.0
H262 A:XCB303 2.7 24.9 1.0
C25 A:XCB303 2.7 18.9 1.0
H331 A:XCB303 2.8 19.5 1.0
HE1 A:TYR67 3.0 17.1 1.0
C26 A:XCB303 3.2 20.7 1.0
HA2 A:GLY209 3.3 23.0 1.0
O A:HOH637 3.3 33.1 0.7
O30 A:XCB303 3.4 22.2 1.0
CE1 A:TYR67 3.8 14.2 1.0
O A:DMS304 3.9 35.2 1.0
C22 A:XCB303 3.9 15.3 1.0
S27 A:XCB303 3.9 22.3 1.0
C24 A:XCB303 4.0 18.2 1.0
H261 A:XCB303 4.1 24.9 1.0
S A:DMS304 4.1 33.2 1.0
CA A:GLY209 4.3 19.1 1.0
O A:HOH492 4.4 26.9 0.8
C23 A:XCB303 4.5 16.5 1.0
HD1 A:TYR67 4.5 16.7 1.0
H351 A:XCB303 4.5 16.6 1.0
OH A:TYR67 4.6 15.3 1.0
O A:HOH715 4.6 32.5 0.9
HG A:SER207 4.6 36.4 0.7
CD1 A:TYR67 4.6 13.9 1.0
C A:GLY209 4.6 19.5 1.0
CZ A:TYR67 4.7 13.9 1.0
H A:GLY209 4.7 24.5 1.0
O A:HOH435 4.7 34.9 0.9
HA3 A:GLY209 4.8 23.0 1.0
H241 A:XCB303 4.8 21.9 1.0
O A:GLY209 4.9 21.2 1.0
O29 A:XCB303 4.9 23.6 1.0
O A:HOH402 4.9 25.9 0.4

Reference:

K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield. Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2482 To Be Published.
Page generated: Tue Jul 30 11:28:17 2024

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