Chlorine in PDB 8pxt: Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood

Protein crystallography data

The structure of Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood, PDB code: 8pxt was solved by M.Jensen, M.Abou Hachem, J.P.Morth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.32 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 92.23, 169.06, 171.97, 90, 90, 90
R / Rfree (%) 18 / 21

Other elements in 8pxt:

The structure of Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood (pdb code 8pxt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood, PDB code: 8pxt:

Chlorine binding site 1 out of 1 in 8pxt

Go back to Chlorine Binding Sites List in 8pxt
Chlorine binding site 1 out of 1 in the Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl705

b:85.0
occ:1.00
HH11 C:ARG210 2.7 94.8 1.0
HH12 C:ARG210 3.1 94.8 1.0
NH1 C:ARG210 3.2 79.0 1.0
HB3 C:ARG210 3.3 71.6 1.0
HB3 C:GLU211 4.0 70.1 1.0
HD2 C:ARG210 4.1 85.3 1.0
O C:ARG210 4.2 53.6 1.0
HA2 C:GLY224 4.2 68.6 1.0
CB C:ARG210 4.3 59.6 1.0
OE1 C:GLU211 4.3 70.0 1.0
CZ C:ARG210 4.4 77.2 1.0
CD C:GLU211 4.7 62.4 1.0
HB2 C:ARG210 4.7 71.6 1.0
O C:GLY224 4.7 53.9 1.0
HG2 C:GLU211 4.7 72.3 1.0
C C:ARG210 4.7 51.2 1.0
CD C:ARG210 4.8 71.1 1.0
CB C:GLU211 4.9 58.4 1.0
HD3 C:PRO226 4.9 57.8 1.0
HG2 C:ARG210 5.0 80.4 1.0
CG C:ARG210 5.0 66.9 1.0
CA C:GLY224 5.0 57.1 1.0
CG C:GLU211 5.0 60.2 1.0
C C:GLY224 5.0 55.7 1.0

Reference:

M.Jensen, L.Stenfelt, J.R.Hagman, M.J.Pichler, J.Weikum, T.S.Nielsen, A.Hult, J.P.Morth, M.L.Olsson, M.Abou Hachem. Akkermansia Muciniphila Exoglycosidases Target Extended Blood Group Antigens to Generate Abo-Universal Blood Nature Microbiology 2024.
Page generated: Tue Jul 30 11:42:13 2024

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