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Chlorine in PDB 8q26: HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide

Protein crystallography data

The structure of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide, PDB code: 8q26 was solved by C.Dian, C.Giglione, T.Meinnel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.47 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.22, 177.87, 57.93, 90, 90, 90
R / Rfree (%) 16.1 / 20.6

Other elements in 8q26:

The structure of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide (pdb code 8q26). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide, PDB code: 8q26:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8q26

Go back to Chlorine Binding Sites List in 8q26
Chlorine binding site 1 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:40.4
occ:1.00
O A:HOH880 2.7 30.2 1.0
NH2 A:ARG202 2.8 28.9 1.0
NE A:ARG202 2.9 25.3 1.0
N A:LEU163 3.0 21.2 1.0
ND1 A:HIS211 3.1 18.1 1.0
CZ A:ARG202 3.3 27.4 1.0
CZ3 A:TRP206 3.4 24.9 1.0
CE1 A:HIS211 3.4 17.5 1.0
O A:LEU161 3.5 22.1 1.0
CB A:LEU163 3.6 24.5 1.0
CG A:LEU163 3.8 24.4 1.0
CH2 A:TRP206 3.8 27.6 1.0
CA A:LEU163 3.9 24.5 1.0
CA A:ASP162 3.9 27.6 1.0
C A:ASP162 4.0 23.8 1.0
O A:HOH629 4.1 29.0 1.0
CE3 A:TRP206 4.1 20.1 1.0
OD1 A:ASP162 4.2 23.1 1.0
CD A:ARG202 4.2 26.8 1.0
N A:GLY164 4.4 26.6 1.0
CG A:HIS211 4.4 17.6 1.0
CD1 A:LEU163 4.4 25.9 1.0
CG A:ARG202 4.4 18.6 1.0
C A:LEU161 4.5 22.7 1.0
C A:LEU163 4.5 26.3 1.0
NH1 A:ARG202 4.6 27.9 1.0
N A:ASP162 4.7 23.0 1.0
CZ2 A:TRP206 4.7 24.3 1.0
NE2 A:HIS211 4.8 19.3 1.0
CA A:PRO208 4.9 19.8 1.0
O A:HOH939 5.0 33.6 1.0
CD2 A:TRP206 5.0 18.8 1.0
CB A:HIS211 5.0 18.7 1.0

Chlorine binding site 2 out of 2 in 8q26

Go back to Chlorine Binding Sites List in 8q26
Chlorine binding site 2 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:34.0
occ:1.00
NH2 B:ARG202 3.0 31.6 1.0
NE B:ARG202 3.1 29.1 1.0
ND1 B:HIS211 3.1 20.9 1.0
CZ3 B:TRP206 3.2 28.2 1.0
N B:LEU163 3.2 22.0 1.0
CE1 B:HIS211 3.3 19.6 1.0
CZ B:ARG202 3.5 32.4 1.0
O B:LEU161 3.6 21.8 1.0
CH2 B:TRP206 3.7 31.9 1.0
CE3 B:TRP206 3.8 22.8 1.0
CB B:LEU163 3.8 24.1 1.0
CG B:LEU163 3.9 22.1 1.0
CA B:ASP162 3.9 21.8 1.0
C B:ASP162 4.0 21.7 1.0
OD1 B:ASP162 4.0 27.2 1.0
CA B:LEU163 4.1 21.1 1.0
CD B:ARG202 4.3 26.2 1.0
CG B:ARG202 4.4 21.8 1.0
CG B:HIS211 4.4 16.5 1.0
CD1 B:LEU163 4.5 24.9 1.0
N B:GLY164 4.5 22.8 1.0
CA B:PRO208 4.5 20.4 1.0
C B:LEU161 4.6 24.2 1.0
CB B:PRO208 4.6 24.0 1.0
NE2 B:HIS211 4.6 16.8 1.0
CZ2 B:TRP206 4.6 29.7 1.0
CD2 B:TRP206 4.7 21.5 1.0
N B:ASP162 4.8 24.0 1.0
C B:LEU163 4.8 27.7 1.0
NH1 B:ARG202 4.8 30.7 1.0
CB B:ASP162 4.9 26.0 1.0
CG B:ASP162 4.9 29.2 1.0

Reference:

C.Dian, C.Giglione, T.Meinnel, F.Riviere, F.R.Dutheil, P.Monassa. HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide To Be Published.
Page generated: Sat Sep 28 19:27:04 2024

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