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Chlorine in PDB 8q2z: HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide

Protein crystallography data

The structure of HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide, PDB code: 8q2z was solved by C.Dian, C.Giglione, T.Meinnel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.68 / 1.88
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.87, 178.3, 58.2, 90, 90, 90
R / Rfree (%) 15.7 / 19.3

Other elements in 8q2z:

The structure of HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide (pdb code 8q2z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide, PDB code: 8q2z:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8q2z

Go back to Chlorine Binding Sites List in 8q2z
Chlorine binding site 1 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:27.1
occ:1.00
NE A:ARG202 3.1 37.4 1.0
NH2 A:ARG202 3.2 31.8 1.0
N A:LEU163 3.2 19.6 1.0
ND1 A:HIS211 3.2 19.3 1.0
CE1 A:HIS211 3.3 19.9 1.0
NE1 A:TRP206 3.4 25.6 1.0
CZ A:ARG202 3.6 33.0 1.0
O A:LEU161 3.7 21.0 1.0
CA A:ASP162 3.9 19.5 1.0
CD1 A:TRP206 4.0 30.0 1.0
C A:ASP162 4.0 18.8 1.0
CB A:LEU163 4.0 21.2 1.0
CB A:PRO208 4.0 25.6 1.0
CG A:LEU163 4.1 25.9 1.0
OD1 A:ASP162 4.1 26.6 1.0
CA A:LEU163 4.2 24.4 1.0
CA A:PRO208 4.2 17.5 1.0
CD A:ARG202 4.3 27.1 1.0
CG A:ARG202 4.4 17.6 1.0
CE2 A:TRP206 4.5 26.6 1.0
N A:GLY164 4.5 24.1 1.0
NE2 A:HIS211 4.6 18.1 1.0
CG A:HIS211 4.6 17.8 1.0
C A:LEU161 4.6 24.8 1.0
CD1 A:LEU163 4.7 26.0 1.0
N A:ASP162 4.7 20.9 1.0
N A:PRO208 4.8 19.9 1.0
CB A:ASP162 4.8 26.5 1.0
C A:LEU163 4.8 28.8 1.0
CG A:ASP162 4.9 38.4 1.0
NH1 A:ARG202 4.9 32.3 1.0

Chlorine binding site 2 out of 2 in 8q2z

Go back to Chlorine Binding Sites List in 8q2z
Chlorine binding site 2 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of HSNMT1 in Complex with Both Myrcoa and Gnllskfr Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:35.1
occ:1.00
NZ A:LYS289 3.1 44.2 1.0
N A:VAL132 3.3 30.3 1.0
N A:SER485 3.3 22.2 1.0
OG A:SER485 3.5 28.4 1.0
O A:VAL132 3.8 32.7 1.0
CA A:PRO484 3.9 22.8 1.0
O A:HOH732 4.0 45.3 1.0
CA A:VAL131 4.0 43.5 1.0
C A:PRO484 4.1 23.4 1.0
CG1 A:VAL131 4.1 38.8 1.0
C A:VAL131 4.1 36.2 1.0
CB A:SER485 4.1 24.6 1.0
CA A:VAL132 4.1 28.5 1.0
CB A:VAL132 4.1 30.1 1.0
CA A:SER485 4.3 23.8 1.0
CE A:LYS289 4.4 33.8 1.0
C A:VAL132 4.4 31.2 1.0
O A:HOH629 4.5 37.7 1.0
CB A:PRO484 4.5 22.8 1.0
O A:GLU130 4.5 45.7 1.0
CG2 A:VAL132 4.6 28.1 1.0
CB A:VAL131 4.6 45.3 1.0
O A:CYS483 4.7 18.9 1.0

Reference:

C.Dian, C.Giglione, T.Meinnel, F.Riviere, F.R.Dutheil, P.Monassa. HSNMT1 in Complex with Both Myrcoa and Gnllskfr Inhibitor Peptide To Be Published.
Page generated: Sat Sep 28 19:27:05 2024

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