Chlorine in PDB 8q3s: HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide
Protein crystallography data
The structure of HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide, PDB code: 8q3s
was solved by
C.Dian,
C.Giglione,
T.Meinnel,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
47.84 /
1.78
|
Space group
|
P 21 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
79.9,
179.17,
58.2,
90,
90,
90
|
R / Rfree (%)
|
17.9 /
21.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide
(pdb code 8q3s). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide, PDB code: 8q3s:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 8q3s
Go back to
Chlorine Binding Sites List in 8q3s
Chlorine binding site 1 out
of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl504
b:28.9
occ:1.00
|
NH2
|
A:ARG202
|
3.1
|
39.4
|
1.0
|
NE
|
A:ARG202
|
3.1
|
34.6
|
1.0
|
N
|
A:LEU163
|
3.2
|
23.8
|
1.0
|
ND1
|
A:HIS211
|
3.3
|
21.9
|
1.0
|
CE1
|
A:HIS211
|
3.3
|
21.5
|
1.0
|
NE1
|
A:TRP206
|
3.4
|
28.3
|
1.0
|
CZ
|
A:ARG202
|
3.5
|
34.7
|
1.0
|
O
|
A:LEU161
|
3.7
|
22.8
|
1.0
|
CA
|
A:ASP162
|
3.9
|
23.6
|
1.0
|
CB
|
A:LEU163
|
3.9
|
23.7
|
1.0
|
CD1
|
A:TRP206
|
4.0
|
28.8
|
1.0
|
OD1
|
A:ASP162
|
4.0
|
28.9
|
1.0
|
CG
|
A:LEU163
|
4.0
|
25.6
|
1.0
|
C
|
A:ASP162
|
4.0
|
25.4
|
1.0
|
CA
|
A:LEU163
|
4.1
|
26.1
|
1.0
|
CB
|
A:PRO208
|
4.2
|
29.6
|
1.0
|
CD
|
A:ARG202
|
4.3
|
27.4
|
1.0
|
CA
|
A:PRO208
|
4.3
|
23.1
|
1.0
|
CG
|
A:ARG202
|
4.4
|
23.6
|
1.0
|
CE2
|
A:TRP206
|
4.4
|
28.9
|
1.0
|
N
|
A:GLY164
|
4.5
|
29.0
|
1.0
|
CG
|
A:HIS211
|
4.6
|
24.5
|
1.0
|
NE2
|
A:HIS211
|
4.6
|
21.7
|
1.0
|
CD1
|
A:LEU163
|
4.6
|
28.2
|
1.0
|
C
|
A:LEU161
|
4.6
|
26.9
|
1.0
|
C
|
A:LEU163
|
4.8
|
31.7
|
1.0
|
N
|
A:ASP162
|
4.8
|
26.6
|
1.0
|
N
|
A:PRO208
|
4.8
|
23.1
|
1.0
|
NH1
|
A:ARG202
|
4.9
|
35.6
|
1.0
|
CB
|
A:ASP162
|
4.9
|
28.5
|
1.0
|
CG
|
A:ASP162
|
4.9
|
41.7
|
1.0
|
CZ2
|
A:TRP206
|
4.9
|
34.1
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 8q3s
Go back to
Chlorine Binding Sites List in 8q3s
Chlorine binding site 2 out
of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl504
b:34.8
occ:1.00
|
O
|
B:HOH832
|
2.8
|
41.9
|
1.0
|
NH2
|
B:ARG202
|
3.0
|
32.6
|
1.0
|
NE
|
B:ARG202
|
3.1
|
34.5
|
1.0
|
CZ3
|
B:TRP206
|
3.1
|
32.0
|
1.0
|
N
|
B:LEU163
|
3.2
|
26.5
|
1.0
|
ND1
|
B:HIS211
|
3.2
|
26.1
|
1.0
|
CE1
|
B:HIS211
|
3.3
|
24.1
|
1.0
|
CZ
|
B:ARG202
|
3.5
|
28.0
|
1.0
|
CH2
|
B:TRP206
|
3.5
|
37.1
|
1.0
|
O
|
B:LEU161
|
3.7
|
25.2
|
1.0
|
CE3
|
B:TRP206
|
3.9
|
24.5
|
1.0
|
CB
|
B:LEU163
|
3.9
|
23.9
|
1.0
|
CA
|
B:ASP162
|
3.9
|
31.1
|
1.0
|
C
|
B:ASP162
|
4.0
|
28.6
|
1.0
|
CG
|
B:LEU163
|
4.0
|
25.9
|
1.0
|
CA
|
B:LEU163
|
4.0
|
25.8
|
1.0
|
OD1
|
B:ASP162
|
4.1
|
25.8
|
1.0
|
CD
|
B:ARG202
|
4.3
|
28.8
|
1.0
|
N
|
B:GLY164
|
4.4
|
29.2
|
1.0
|
CG
|
B:ARG202
|
4.4
|
20.8
|
1.0
|
CZ2
|
B:TRP206
|
4.5
|
27.4
|
1.0
|
CG
|
B:HIS211
|
4.6
|
19.9
|
1.0
|
C
|
B:LEU161
|
4.6
|
28.1
|
1.0
|
CA
|
B:PRO208
|
4.6
|
26.2
|
1.0
|
C
|
B:LEU163
|
4.6
|
31.1
|
1.0
|
NE2
|
B:HIS211
|
4.7
|
23.7
|
1.0
|
CD1
|
B:LEU163
|
4.7
|
29.3
|
1.0
|
CB
|
B:PRO208
|
4.7
|
29.2
|
1.0
|
N
|
B:ASP162
|
4.7
|
29.1
|
1.0
|
NH1
|
B:ARG202
|
4.8
|
33.9
|
1.0
|
CD2
|
B:TRP206
|
4.8
|
20.6
|
1.0
|
CB
|
B:ASP162
|
4.9
|
28.6
|
1.0
|
CG
|
B:ASP162
|
5.0
|
34.2
|
1.0
|
|
Reference:
C.Dian,
C.Giglione,
T.Meinnel,
F.Riviere,
F.R.Dutheil,
P.Monassa.
HSNMT1 in Complex with Both Myrcoa and Gncfskar Inhibitor Peptide To Be Published.
Page generated: Sat Sep 28 19:27:08 2024
|