Chlorine in PDB 8qdd: Structure of Mbaojin at pH 8.5

The structure of Structure of Mbaojin at pH 8.5, PDB code: 8qdd was solved by V.R.Samygina, A.V.Vlaskina, A.Gabdulkhakov, O.M.Subach, F.V.Subach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	45.59, 120.266, 52.903, 90, 105.49, 90
R / Rfree (%)	18.6 / 22.9

The binding sites of Chlorine atom in the Structure of Mbaojin at pH 8.5 (pdb code 8qdd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Mbaojin at pH 8.5, PDB code: 8qdd:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Mbaojin at pH 8.5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Mbaojin at pH 8.5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:17.0 occ:1.00 O A:HOH439 3.0 12.5 1.0 NZ A:LYS59 3.3 14.8 1.0 NH2 A:ARG84 3.4 5.3 1.0 NZ A:LYS190 3.6 16.5 1.0 CB A:CYS148 3.7 10.1 1.0 CE A:LYS59 3.8 15.3 1.0 OG1 A:THR170 3.8 5.5 1.0 NE2 A:GLN168 3.9 6.5 1.0 CD1 A:CR257 4.0 6.1 1.0 CB2 A:CR257 4.1 7.4 1.0 CB A:THR170 4.2 6.2 1.0 CG1 A:VAL137 4.2 10.9 1.0 SG A:CYS148 4.3 12.5 1.0 O2 A:CR257 4.4 8.4 1.0 CE A:LYS190 4.5 15.4 1.0 CZ A:ARG84 4.5 5.5 1.0 CG2 A:CR257 4.6 6.6 1.0 CG2 A:THR170 4.7 5.7 1.0 O A:CYS148 4.9 9.3 1.0 NE A:ARG84 4.9 5.6 1.0 CE1 A:CR257 5.0 6.9 1.0

Chlorine binding site 2 out of 2 in the Structure of Mbaojin at pH 8.5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Mbaojin at pH 8.5 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl302 b:15.3 occ:1.00 O C:HOH416 3.0 14.1 1.0 NZ C:LYS59 3.2 17.1 1.0 NH2 C:ARG84 3.4 6.6 1.0 NZ C:LYS190 3.6 19.7 1.0 CE C:LYS59 3.7 17.4 1.0 CB C:CYS148 3.7 10.0 1.0 OG1 C:THR170 3.8 8.8 1.0 CD1 C:CR257 3.9 6.6 1.0 NE2 C:GLN168 4.0 8.1 1.0 CG1 C:VAL137 4.1 10.3 1.0 CB2 C:CR257 4.1 7.9 1.0 CB C:THR170 4.2 8.7 1.0 SG C:CYS148 4.3 12.8 1.0 O2 C:CR257 4.4 7.3 1.0 CE C:LYS190 4.4 17.7 1.0 CZ C:ARG84 4.5 6.3 1.0 CG2 C:CR257 4.5 7.6 1.0 CG2 C:THR170 4.7 8.5 1.0 O C:CYS148 4.9 9.2 1.0 CE1 C:CR257 4.9 6.6 1.0 NE C:ARG84 4.9 5.8 1.0

G.D.Lesnov, X.Zhang, O.M.Subach, A.V.Vlaskina, V.R.Samygina, A.Y.Nikolaeva, A.Gabdulkhakov, W.Qin, V.Borshchevskiy, M.M.Perfilov, A.S.Mishin, K.D.Piatkevich, F.V.Subach. Bright and Stable Monomeric Fluorescent Protein Derived From Staygold To Be Published.