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Chlorine in PDB 8qgw: Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide

Protein crystallography data

The structure of Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide, PDB code: 8qgw was solved by D.Wohlwend, T.Friedrich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.63 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.537, 116.328, 189.621, 90, 90, 90
R / Rfree (%) 16.2 / 18.7

Other elements in 8qgw:

The structure of Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide also contains other interesting chemical elements:

Iron (Fe) 12 atoms
Sodium (Na) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide (pdb code 8qgw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide, PDB code: 8qgw:

Chlorine binding site 1 out of 1 in 8qgw

Go back to Chlorine Binding Sites List in 8qgw
Chlorine binding site 1 out of 1 in the Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl505

b:66.1
occ:1.00
NH1 B:ARG87 3.2 25.6 1.0
O B:HOH931 3.2 42.2 1.0
O B:HOH859 3.6 42.5 1.0
NH2 B:ARG87 3.9 24.9 1.0
CZ B:ARG87 4.0 24.4 1.0
O B:HOH749 4.2 36.8 1.0
O B:HOH1000 4.9 40.1 1.0

Reference:

D.Wohlwend, L.Merono, S.Bucka, K.Ritter, H.J.Jessen, T.Friedrich. Structures of 3-Acetylpyridine Adenine Dinucleotide and Adp-Ribose Bound to the Electron Input Module of Respiratory Complex I. Structure 2024.
ISSN: ISSN 0969-2126
PubMed: 38503292
DOI: 10.1016/J.STR.2024.02.013
Page generated: Tue Jul 30 11:58:29 2024

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