Chlorine in PDB 8quu: Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections

Protein crystallography data

The structure of Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections, PDB code: 8quu was solved by R.Duman, A.Wagner, J.Kamps, A.Orville, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.35 / 2.70
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 51.557, 52.755, 54.952, 107.21, 99.03, 109.31
R / Rfree (%) 17.6 / 22.3

Other elements in 8quu:

The structure of Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections (pdb code 8quu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections, PDB code: 8quu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8quu

Go back to Chlorine Binding Sites List in 8quu
Chlorine binding site 1 out of 2 in the Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:20.2
occ:1.00
N A:LEU129 3.7 21.5 1.0
CB A:LEU129 3.9 19.2 1.0
O A:HOH326 4.3 11.7 1.0
CA A:ARG128 4.4 25.7 1.0
C A:ARG128 4.4 23.7 1.0
CA A:LEU129 4.4 20.0 1.0
NH2 A:ARG127 4.7 20.6 1.0
NE A:ARG127 4.7 21.5 1.0
O A:ARG127 4.7 22.4 1.0
CG A:ARG127 4.9 22.1 1.0
CZ A:ARG127 4.9 21.2 1.0
O A:LEU129 4.9 18.1 1.0

Chlorine binding site 2 out of 2 in 8quu

Go back to Chlorine Binding Sites List in 8quu
Chlorine binding site 2 out of 2 in the Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Chlorite Dismutase at 3000 Ev Based on Spherical Harmonics Absorption Corrections within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:25.2
occ:1.00
N B:LEU129 3.6 22.0 1.0
O B:HOH304 3.8 23.1 1.0
CB B:LEU129 3.8 19.4 1.0
CA B:ARG128 4.2 24.4 1.0
C B:ARG128 4.3 22.7 1.0
CA B:LEU129 4.3 20.5 1.0
O B:ARG127 4.6 24.3 1.0
NH2 B:ARG127 4.6 28.3 1.0
NE B:ARG127 4.8 25.7 1.0
O B:LEU129 4.8 19.3 1.0
CZ B:ARG127 4.8 27.4 1.0
O B:HOH323 4.9 26.2 1.0
CG B:ARG127 4.9 24.9 1.0
N B:ARG128 5.0 23.3 1.0
C B:ARG127 5.0 25.4 1.0

Reference:

Y.Lu, R.Duman, J.Beilsten-Edmands, G.Winter, M.Basham, G.Evans, J.J.A.G.Kamps, A.M.Orville, H.S.Kwong, K.Beis, W.Armour, A.Wagner. Ray-Tracing Analytical Absorption Correction For X-Ray Crystallography Based on Tomographic Reconstructions. J.Appl.Crystallogr. V. 57 649 2024.
ISSN: ISSN 0021-8898
PubMed: 38846772
DOI: 10.1107/S1600576724002243
Page generated: Tue Jul 30 12:03:54 2024

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