Chlorine in PDB 8r2t: Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1)
Protein crystallography data
The structure of Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1), PDB code: 8r2t
was solved by
M.Zahn,
E.Kuatsjah,
D.Salvachua,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
159.73 /
1.82
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
112.216,
64.789,
160.1,
90,
93.9,
90
|
R / Rfree (%)
|
17.9 /
22.5
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1)
(pdb code 8r2t). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1), PDB code: 8r2t:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 8r2t
Go back to
Chlorine Binding Sites List in 8r2t
Chlorine binding site 1 out
of 2 in the Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1)
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:18.8
occ:1.00
|
O
|
A:HOH693
|
3.0
|
22.0
|
1.0
|
O
|
A:HOH785
|
3.1
|
18.2
|
1.0
|
N
|
A:GLY327
|
3.1
|
15.7
|
1.0
|
N
|
A:GLN326
|
3.2
|
15.7
|
1.0
|
CA
|
A:PRO322
|
3.3
|
20.9
|
1.0
|
N10
|
A:FAD501
|
3.4
|
17.1
|
1.0
|
C10
|
A:FAD501
|
3.4
|
16.5
|
1.0
|
N1
|
A:FAD501
|
3.6
|
16.2
|
1.0
|
CA
|
A:ALA325
|
3.7
|
16.9
|
1.0
|
C1'
|
A:FAD501
|
3.7
|
17.5
|
1.0
|
N
|
A:ALA325
|
3.7
|
20.3
|
1.0
|
O
|
A:PRO322
|
3.7
|
21.6
|
1.0
|
C
|
A:PRO322
|
3.8
|
19.6
|
1.0
|
C4X
|
A:FAD501
|
3.8
|
16.4
|
1.0
|
CA
|
A:GLY327
|
3.8
|
15.8
|
1.0
|
C9A
|
A:FAD501
|
3.8
|
17.4
|
1.0
|
C
|
A:ALA325
|
3.9
|
15.3
|
1.0
|
CB
|
A:PRO322
|
3.9
|
18.7
|
1.0
|
C
|
A:GLN326
|
4.1
|
14.5
|
1.0
|
O
|
A:LEU321
|
4.2
|
20.3
|
1.0
|
CA
|
A:GLN326
|
4.2
|
15.7
|
1.0
|
N5
|
A:FAD501
|
4.3
|
18.2
|
1.0
|
C5X
|
A:FAD501
|
4.3
|
17.5
|
1.0
|
C2
|
A:FAD501
|
4.3
|
16.0
|
1.0
|
N
|
A:PRO322
|
4.4
|
18.6
|
1.0
|
C4
|
A:FAD501
|
4.5
|
17.0
|
1.0
|
C9
|
A:FAD501
|
4.5
|
17.2
|
1.0
|
CG
|
A:MET320
|
4.6
|
28.9
|
1.0
|
SD
|
A:MET320
|
4.6
|
35.9
|
1.0
|
N3
|
A:FAD501
|
4.6
|
16.7
|
1.0
|
C
|
A:LEU321
|
4.7
|
19.2
|
1.0
|
C
|
A:ARG324
|
4.8
|
18.9
|
1.0
|
N
|
A:TYR323
|
4.8
|
18.9
|
1.0
|
N
|
A:ARG324
|
5.0
|
21.4
|
1.0
|
O
|
A:ALA325
|
5.0
|
16.2
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 8r2t
Go back to
Chlorine Binding Sites List in 8r2t
Chlorine binding site 2 out
of 2 in the Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1)
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of 4-Hydroxybenzoate-1-Hydroxylase From Gelatoporia Subvermispora (GSMNX1) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl502
b:36.1
occ:1.00
|
O
|
B:HOH636
|
3.0
|
33.3
|
1.0
|
N
|
B:GLY327
|
3.1
|
39.8
|
1.0
|
CA
|
B:PRO322
|
3.3
|
43.0
|
1.0
|
N
|
B:GLN326
|
3.3
|
33.7
|
1.0
|
C10
|
B:FAD501
|
3.4
|
39.9
|
1.0
|
N10
|
B:FAD501
|
3.4
|
41.9
|
1.0
|
CA
|
B:ALA325
|
3.7
|
32.0
|
1.0
|
O
|
B:PRO322
|
3.7
|
36.3
|
1.0
|
N1
|
B:FAD501
|
3.7
|
41.2
|
1.0
|
CB
|
B:PRO322
|
3.7
|
41.1
|
1.0
|
N
|
B:ALA325
|
3.8
|
32.8
|
1.0
|
C1'
|
B:FAD501
|
3.8
|
41.5
|
1.0
|
CA
|
B:GLY327
|
3.8
|
41.6
|
1.0
|
C
|
B:PRO322
|
3.8
|
38.7
|
1.0
|
C4X
|
B:FAD501
|
3.8
|
39.4
|
1.0
|
C9A
|
B:FAD501
|
3.8
|
42.7
|
1.0
|
C
|
B:ALA325
|
3.9
|
32.8
|
1.0
|
C
|
B:GLN326
|
4.1
|
37.8
|
1.0
|
C5X
|
B:FAD501
|
4.2
|
43.6
|
1.0
|
N5
|
B:FAD501
|
4.2
|
40.4
|
1.0
|
CA
|
B:GLN326
|
4.3
|
35.2
|
1.0
|
O
|
B:LEU321
|
4.3
|
42.9
|
1.0
|
C2
|
B:FAD501
|
4.4
|
39.4
|
1.0
|
N
|
B:PRO322
|
4.4
|
42.5
|
1.0
|
C4
|
B:FAD501
|
4.5
|
39.4
|
1.0
|
CG
|
B:MET320
|
4.5
|
53.4
|
1.0
|
C9
|
B:FAD501
|
4.6
|
43.3
|
1.0
|
SD
|
B:MET320
|
4.6
|
55.5
|
1.0
|
N3
|
B:FAD501
|
4.7
|
39.3
|
1.0
|
C
|
B:LEU321
|
4.8
|
42.0
|
1.0
|
C
|
B:ARG324
|
4.8
|
32.7
|
1.0
|
N
|
B:TYR323
|
4.8
|
36.9
|
1.0
|
|
Reference:
A.Schwartz,
E.Kuatsjah,
M.Zahn,
D.Salvachua.
Biochemical and Structural Characterization Hydroquinone Catabolic Pathway From White-Rot Fungi To Be Published.
Page generated: Wed Nov 27 17:06:53 2024
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