Chlorine in PDB 8r30: Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
Enzymatic activity of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
All present enzymatic activity of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408:
3.5.2.6;
Protein crystallography data
The structure of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408, PDB code: 8r30
was solved by
C.L.Tooke,
P.Hinchliffe,
J.Spencer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
31.72 /
0.85
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
44.252,
45.506,
117.416,
90,
90,
90
|
R / Rfree (%)
|
12.4 /
13.7
|
Other elements in 8r30:
The structure of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408 also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
(pdb code 8r30). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408, PDB code: 8r30:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 8r30
Go back to
Chlorine Binding Sites List in 8r30
Chlorine binding site 1 out
of 2 in the Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl306
b:10.3
occ:1.00
|
H
|
A:ALA227
|
2.4
|
9.2
|
1.0
|
HA
|
A:PRO226
|
3.0
|
8.6
|
1.0
|
O
|
A:HOH618
|
3.2
|
13.8
|
1.0
|
N
|
A:ALA227
|
3.2
|
9.3
|
1.0
|
HB1
|
A:ALA227
|
3.4
|
12.6
|
1.0
|
HB3
|
A:PRO226
|
3.5
|
9.6
|
1.0
|
HB3
|
A:ALA227
|
3.7
|
12.6
|
1.0
|
CA
|
A:PRO226
|
3.7
|
8.7
|
1.0
|
CB
|
A:ALA227
|
3.9
|
12.2
|
1.0
|
C
|
A:PRO226
|
4.0
|
8.7
|
1.0
|
CB
|
A:PRO226
|
4.1
|
9.7
|
1.0
|
CA
|
A:ALA227
|
4.2
|
10.7
|
1.0
|
H
|
A:SER228
|
4.5
|
11.2
|
1.0
|
O
|
A:HOH611
|
4.6
|
31.1
|
1.0
|
O
|
A:HOH669
|
4.7
|
41.5
|
1.0
|
HB2
|
A:PRO226
|
4.7
|
9.6
|
1.0
|
HA
|
A:ALA227
|
4.8
|
10.4
|
1.0
|
HB2
|
A:ALA227
|
4.8
|
12.6
|
1.0
|
HG3
|
A:PRO226
|
4.9
|
9.5
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 8r30
Go back to
Chlorine Binding Sites List in 8r30
Chlorine binding site 2 out
of 2 in the Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl307
b:8.9
occ:1.00
|
HG1
|
A:THR235
|
2.3
|
7.0
|
1.0
|
H6
|
A:XR3301
|
2.4
|
6.7
|
0.9
|
O
|
A:HOH443
|
2.8
|
10.5
|
0.4
|
HB
|
A:THR235
|
3.0
|
6.4
|
1.0
|
OG1
|
A:THR235
|
3.0
|
7.0
|
1.0
|
HA2
|
A:GLY236
|
3.1
|
6.1
|
1.0
|
H16
|
A:XR3301
|
3.2
|
8.2
|
0.9
|
N6
|
A:XR3301
|
3.2
|
6.9
|
0.9
|
O
|
A:HOH443
|
3.3
|
9.4
|
0.6
|
OG
|
A:SER237
|
3.3
|
12.0
|
0.8
|
HB3
|
A:SER237
|
3.4
|
10.8
|
0.2
|
CB
|
A:THR235
|
3.5
|
6.6
|
1.0
|
H
|
A:SER237
|
3.6
|
7.2
|
0.8
|
HB2
|
A:SER237
|
3.6
|
10.8
|
0.2
|
C16
|
A:XR3301
|
3.6
|
8.4
|
0.9
|
OG
|
A:SER237
|
3.6
|
10.9
|
0.0
|
CA
|
A:GLY236
|
3.6
|
6.2
|
1.0
|
N
|
A:GLY236
|
3.6
|
5.5
|
1.0
|
H
|
A:SER237
|
3.6
|
7.2
|
0.0
|
HB3
|
A:SER237
|
3.6
|
10.8
|
0.0
|
C
|
A:GLY236
|
3.6
|
6.2
|
1.0
|
HB2
|
A:SER237
|
3.6
|
10.8
|
0.8
|
N
|
A:SER237
|
3.6
|
6.6
|
0.8
|
N
|
A:SER237
|
3.6
|
7.2
|
0.0
|
H
|
A:SER237
|
3.6
|
7.2
|
0.2
|
N
|
A:SER237
|
3.7
|
7.2
|
0.2
|
O3
|
A:XR3301
|
3.7
|
6.9
|
0.9
|
C
|
A:THR235
|
3.7
|
5.2
|
1.0
|
H5B
|
A:XR3301
|
3.8
|
6.7
|
0.9
|
HG
|
A:SER237
|
3.8
|
11.7
|
0.0
|
O1
|
A:XR3301
|
3.8
|
9.7
|
0.9
|
H
|
A:GLY236
|
3.9
|
5.4
|
1.0
|
CB
|
A:SER237
|
3.9
|
10.3
|
0.2
|
O17
|
A:XR3301
|
3.9
|
8.4
|
0.9
|
CB
|
A:SER237
|
3.9
|
10.6
|
0.8
|
C8
|
A:XR3301
|
4.0
|
8.0
|
0.9
|
S7
|
A:XR3301
|
4.0
|
7.5
|
0.9
|
C5
|
A:XR3301
|
4.0
|
6.8
|
0.9
|
HG
|
A:SER237
|
4.0
|
11.7
|
0.8
|
CB
|
A:SER237
|
4.0
|
10.2
|
0.0
|
O
|
A:THR235
|
4.0
|
5.9
|
1.0
|
HB2
|
A:SER70
|
4.1
|
5.6
|
1.0
|
HH21
|
A:ARG274
|
4.1
|
13.2
|
0.6
|
HG
|
A:SER130
|
4.1
|
6.5
|
1.0
|
O
|
A:GLY236
|
4.2
|
9.1
|
1.0
|
CA
|
A:THR235
|
4.3
|
5.4
|
1.0
|
HG1
|
A:THR216
|
4.3
|
7.1
|
1.0
|
B2
|
A:XR3301
|
4.3
|
6.3
|
0.9
|
C15
|
A:XR3301
|
4.3
|
8.6
|
0.9
|
C4
|
A:XR3301
|
4.4
|
6.6
|
0.9
|
CA
|
A:SER237
|
4.4
|
7.5
|
0.8
|
CA
|
A:SER237
|
4.4
|
8.2
|
0.2
|
CA
|
A:SER237
|
4.4
|
8.3
|
0.0
|
HA3
|
A:GLY236
|
4.5
|
6.1
|
1.0
|
H15
|
A:XR3301
|
4.5
|
8.6
|
0.9
|
H1
|
A:XR3301
|
4.6
|
9.5
|
0.9
|
HB
|
A:THR216
|
4.6
|
7.7
|
1.0
|
HG23
|
A:THR235
|
4.6
|
7.1
|
1.0
|
HE
|
A:ARG274
|
4.6
|
10.4
|
0.6
|
HZ2
|
A:LYS234
|
4.6
|
6.5
|
1.0
|
HZ1
|
A:LYS234
|
4.7
|
6.5
|
1.0
|
CG2
|
A:THR235
|
4.7
|
7.1
|
1.0
|
OG
|
A:SER130
|
4.8
|
6.5
|
1.0
|
HB3
|
A:SER237
|
4.8
|
10.8
|
0.8
|
O
|
A:HOH521
|
4.8
|
7.3
|
1.0
|
H5A
|
A:XR3301
|
4.9
|
6.7
|
0.9
|
O
|
A:HOH435
|
4.9
|
21.4
|
0.6
|
HA
|
A:THR235
|
4.9
|
5.3
|
1.0
|
HB2
|
A:SER237
|
4.9
|
10.8
|
0.0
|
HB2
|
A:SER130
|
4.9
|
6.9
|
1.0
|
CB
|
A:SER70
|
4.9
|
5.7
|
1.0
|
NH2
|
A:ARG274
|
5.0
|
11.4
|
0.6
|
C9
|
A:XR3301
|
5.0
|
8.1
|
0.9
|
NZ
|
A:LYS234
|
5.0
|
6.4
|
1.0
|
HA
|
A:SER237
|
5.0
|
8.3
|
0.2
|
HA
|
A:SER237
|
5.0
|
8.3
|
0.8
|
|
Reference:
C.L.Tooke,
P.Hinchliffe,
J.Spencer.
Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408 To Be Published.
Page generated: Wed Nov 27 17:06:55 2024
|