Chlorine in PDB 8rel: Fab of An Anti-PVAMA1 Monoclonal Antibody

The structure of Fab of An Anti-PVAMA1 Monoclonal Antibody, PDB code: 8rel was solved by G.A.Bentley, F.A.Saul, B.Vulliez-Lenormand, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.24 / 2.10
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	53.49, 61.52, 116.99, 90, 97.49, 90
R / Rfree (%)	20 / 25.5

The binding sites of Chlorine atom in the Fab of An Anti-PVAMA1 Monoclonal Antibody (pdb code 8rel). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Fab of An Anti-PVAMA1 Monoclonal Antibody, PDB code: 8rel:

Chlorine binding site 1 out of 1 in the Fab of An Anti-PVAMA1 Monoclonal Antibody


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Fab of An Anti-PVAMA1 Monoclonal Antibody within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl301 b:27.8 occ:1.00 N H:TRP154 3.1 22.3 1.0 CA H:THR153 3.6 24.0 1.0 CA H:GLY157 3.7 37.3 1.0 O H:HOH440 3.8 48.8 1.0 C H:THR153 3.9 23.2 1.0 CA H:SER160 3.9 42.6 1.0 CB H:TRP154 3.9 20.9 1.0 CB H:SER160 3.9 43.5 1.0 CA H:TRP154 3.9 22.5 1.0 O H:TRP154 3.9 23.9 1.0 CD1 H:TRP154 4.0 19.4 1.0 CB H:THR153 4.1 25.6 1.0 N H:GLY157 4.1 35.1 1.0 N H:SER160 4.2 44.2 1.0 CG2 H:VAL163 4.2 27.4 1.0 CG H:TRP154 4.3 19.8 1.0 O H:VAL152 4.4 22.4 1.0 C H:GLY157 4.4 38.6 1.0 C H:TRP154 4.4 23.9 1.0 O H:GLY157 4.5 40.3 1.0 C H:LEU159 4.6 45.6 1.0 N H:THR153 4.8 23.1 1.0 CG2 H:THR153 4.9 25.7 1.0 OG H:SER160 4.9 45.1 1.0 N H:LEU159 5.0 45.9 1.0

F.A.Saul, B.Vulliez-Le Normand, A.Boes, H.Spiegel, C.H.M.Kocken, B.W.Faber, G.A.Bentley. Conformational Variability in the D2 Loop of Plasmodium Apical Membrane Antigen 1. J Struct Biol X V. 10 00110 2024.
ISSN: ESSN 2590-1524
PubMed: 39324028
DOI: 10.1016/J.YJSBX.2024.100110