Chlorine in PDB 8rnv: Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2

All present enzymatic activity of Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2:
3.2.1.17;

The structure of Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2, PDB code: 8rnv was solved by M.Oszajca, M.Flejszar, A.Szura, P.Drozdz, M.Brindell, K.Kurpiewska, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.06 / 1.08
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.542, 78.542, 37.106, 90, 90, 90
R / Rfree (%)	15.4 / 16.7

The structure of Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2 also contains other interesting chemical elements:

Sodium	(Na)	3 atoms
Ruthenium	(Ru)	2 atoms

The binding sites of Chlorine atom in the Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2 (pdb code 8rnv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2, PDB code: 8rnv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl208 b:18.4 occ:1.00 ND2 A:ASN113 3.3 17.9 1.0 CB A:ASN113 3.6 16.4 1.0 CA A:ALA110 3.8 18.1 1.0 CG A:ASN113 3.9 17.6 1.0 O A:VAL109 4.2 19.4 1.0 CB A:ALA110 4.2 19.5 1.0 N A:ALA110 4.3 18.2 1.0 CG1 A:VAL109 4.3 23.1 1.0 CD A:ARG114 4.4 17.6 1.0 C A:VAL109 4.4 19.3 1.0 CG A:ARG114 4.5 18.1 1.0 O A:HOH412 4.7 45.5 1.0 C A:ALA110 4.9 16.5 1.0 CA A:ASN113 4.9 16.0 1.0 O A:ALA110 4.9 16.6 1.0

Chlorine binding site 2 out of 2 in the Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl209 b:25.3 occ:1.00 OG A:SER24 3.0 19.4 1.0 N A:GLY26 3.1 14.6 1.0 CB A:SER24 3.5 18.0 1.0 CA A:GLY26 3.5 14.6 1.0 CA A:GLN121 3.6 22.9 1.0 CB A:GLN121 3.9 28.2 1.0 CD1 A:ILE124 4.0 25.4 1.0 N A:GLN121 4.0 20.9 1.0 N A:LEU25 4.1 16.2 1.0 CG1 A:ILE124 4.2 23.3 1.0 C A:LEU25 4.3 15.6 1.0 C A:SER24 4.3 16.0 1.0 CG A:GLN121 4.3 35.0 1.0 C A:VAL120 4.3 19.1 1.0 O A:VAL120 4.4 18.6 1.0 CG2 A:VAL120 4.4 20.1 1.0 C A:GLY26 4.5 14.0 1.0 CA A:SER24 4.6 16.2 1.0 N A:ASN27 4.6 14.3 1.0 CA A:LEU25 4.7 15.6 1.0 O A:SER24 4.8 16.5 1.0 C A:GLN121 4.9 21.5 1.0 CB A:LEU25 5.0 17.0 1.0

M.Oszajca, M.Flejszar, A.Szura, P.Drozdz, M.Brindell, K.Kurpiewska. Exploring the Coordination Chemistry of Ruthenium Complexes with Lysozymes: Structural and in Solution Studies To Be Published.