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Chlorine in PDB 8rud: Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant

Protein crystallography data

The structure of Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant, PDB code: 8rud was solved by K.Pokrywka, M.Grzechowiak, J.Sliwiak, P.Worsztynowicz, J.I.Loch, M.Ruszkowski, M.Gilski, M.Jaskolski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.86 / 2.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 78.066, 91.386, 114.547, 90, 96.9, 90
R / Rfree (%) 20.6 / 26.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant (pdb code 8rud). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant, PDB code: 8rud:

Chlorine binding site 1 out of 1 in 8rud

Go back to Chlorine Binding Sites List in 8rud
Chlorine binding site 1 out of 1 in the Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rhizobium Etli L-Asparaginase Reav K138A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:36.4
occ:1.00
OG1 A:THR341 3.2 22.3 1.0
NH1 A:ARG12 3.2 20.5 1.0
CB A:ASN335 3.6 25.2 1.0
CA B:GLY188 3.7 22.0 1.0
CA A:ASN335 3.8 24.3 1.0
NH2 A:ARG12 3.9 18.6 1.0
CZ A:ARG12 4.1 23.1 1.0
CG2 A:THR341 4.1 22.8 1.0
CB A:THR341 4.1 22.0 1.0
N B:GLY188 4.1 23.0 1.0
N A:ASN335 4.2 23.0 1.0
O A:HOH619 4.2 29.8 1.0
O B:HOH666 4.4 39.1 1.0
C A:VAL334 4.4 28.8 1.0
O A:VAL334 4.5 33.8 1.0
C B:ASP187 4.5 21.9 1.0
O A:HOH596 4.5 21.8 1.0
O B:ASP187 4.5 19.5 1.0
C B:GLY188 5.0 21.7 1.0
N A:VAL334 5.0 23.9 1.0
CG A:ASN335 5.0 24.2 1.0

Reference:

K.Pokrywka, M.Grzechowiak, J.Sliwiak, P.Worsztynowicz, J.I.Loch, M.Ruszkowski, M.Gilski, M.Jaskolski. Probing the Active Site of Class 3 L-Asparaginase By Mutagenesis. I. Tinkering with the Zinc Coordination Site of Reav Front Chem 2024.
ISSN: ESSN 2296-2646
DOI: 10.3389/FCHEM.2024.1381032
Page generated: Tue Jul 30 12:19:30 2024

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